Cm 12.1 Update - Bricked Phone
Well I was forced to use adb sideload to reflash my phone. If this happens to anybody else, follow these steps to fix the issue:

Install ADB on your computer, tutorials are easy to find, just Google.

Boot to Recovery and navigate to adb sideload.

Now set adb sideload on your phone and from you computer type
adb sideload rom_image.zip   where rom_image.zip should be your ROM's file name.


This should reflash your phone.