Where can I get parts lists from sets by numbered bag?
I'm afraid there's no registry keeping records of elements included in each numbered part.
Instructions for 75093 set show which parts of a set could be assembled from each numbered bag, including parts for each step. You can then collect elements listed under each step to combine into numbered bags of your own. Getting all extra pieces might be a little hard, since you cannot check what is included in sealed bags. However you can guess which ones should have been included in opened bags. You can check which Extra parts come at the bottom on Bricklink's page for 75093 set.