LEGO kit 42082 step 1041 issue
I'm assuming all parts you have are not damaged as this is possible, but highly unlikely, event.

I've tried to connect both parts myself. And this piece



is indeed harder to push into desired location as pictured in step 1041. Unlike the same hole from the other side of the panel. I've encountered this myself quite a few times while building other models. If you check both ends of the hole on a panel you'll notice that one has outer ring, which helps centering the connector, unlike the spot in 1041 step. I find it just a little harder to center the piece, but eventually it goes in and feels like it supposed to be there. 

You can use something to help you with a task, like a 3L Technic pin, which can be attached to connector to help with a task.