Arduno Uno voltage in via VIN pin or DC power?
DC Jack has a Reverse Protection Diode, that drops 0.7V at usable currents. The VIN does not. Both go through the on board LM7805 or similar linear regulator. The USB does not, but it does go through a P-Channel Mosfet used to switch between USB and DC/VIN power before connecting to the 5V rail. The 5V pin bypasses the regulator, Diode, and P-Channel Mosfet completely.

The advantage of the DC jack is that the Reverse Protection Diode is used, preventing reverse voltage problems if you wire it wrong.