Re-enable Arduino after short
Most likely, your motherboard detected a over-current situation, and disabled power to that port. Since it has to way to know if the cause of the over-current has been fixed, it will continue to disable the port (since the only way to know would be to turn the power back on, and doing that to many times might cause permanent damage). 

I wouldn't expect there to be a way to force your MoBo to reset the port, as this is an unlikely event. You should be glad the MoBo prevented any damage.

Using a different port sounds like an okay solution.