Mystery of the Abbey - How to track clues over time?
What I do in games such as these is to make use of the directions my opponents face.  So, on the box for each monk, the player across from me will get the top-center of the box, while the player to my left gets the lower left of the box.  My notes will go in the appropriate location of the box for each player.  As for tracking the card movements, it's best to assume that knowledge is always shared, even if it wasn't, so the elimination note will pass from player A to player B anytime they exchange information.  This allows you to ask questions that you're SURE will leas to new information (if the question is answered as you hope), instead of possibly redundant information.