Reference value for two-electron repulsion integral over GTO's
You don't state which method you implemented in order to compute two-electron integrals, therefore I will list all the main references at first.

Cook's book [1] contains analytical formulas for overlap, kinetic, electron-nucleus attraction and electron-electron repulsion integrals. The analytical formula for electron-electron repulsion integrals is wrong in the book, but you can look at this discussion for the errata.

However, a Full CI calculation is computationally costly. For this reason I believe a better approach would be to use a more efficient scheme to compute integrals. You can look at the following:


Obara-Saika scheme
McMurchie-Davidson scheme
Rys quadrature


You can find a good explanation of these methods in Ref. [2].

Now, if you want to check what you already implemented, you can find a list of the two-electron integrals in the STO-3G basis set for $\ce{HeH+}$ in Szabo's book appendix [3]. Here I can give you a set of two-electron integrals I obtain for $\ce{H2}$ (always in the STO-3G basis set) for a bond length of $1.4$ Bohr:

 (           1           1           1           1 )   0.77460834925515787
 (           1           1           1           2 )   0.44410904384277344
 (           1           1           2           1 )   0.44410904384277350
 (           1           1           2           2 )   0.56967771733030592
 (           1           2           1           1 )   0.44410904384277361
 (           1           2           1           2 )   0.29702946944511982
 (           1           2           2           1 )   0.29702946944511982
 (           1           2           2           2 )   0.44410904384277333
 (           2           1           1           1 )   0.44410904384277333
 (           2           1           1           2 )   0.29702946944511982
 (           2           1           2           1 )   0.29702946944511982
 (           2           1           2           2 )   0.44410904384277361
 (           2           2           1           1 )   0.56967771733030592
 (           2           2           1           2 )   0.44410904384277350
 (           2           2           2           1 )   0.44410904384277344
 (           2           2           2           2 )   0.77460834925515787


Note that these results came from a program I wrote myself, but it usually match very well Szabo's [3] and Gaussian09 values for the total energy. If these results match your calculations, then the problem might be in integrals with higher angular momentum.

[1] Cook, Handbook of Computational Chemistry, Oxford University Press, 1998.

[2] T. Helgaker, P. Jørgensen and J. Olsen, Molecular Electronic-Structure Theory, Wiley, 2000.

[3]  A. Szabo and N. Ostlund, Modern Quantum Chemistry, Dover, 1996.