;;;; -*- mode: Lisp; Syntax: Common-Lisp; Package: cl-user; -*-

(in-package :cl-user) 

;;; +=========================================================================+
  | Copyright ( c ) 2005 JP  ,   ,   ,      |
;;; |                                                                         |
;;; | Permission is hereby granted, free of charge, to any person obtaining   |
;;; | a copy of this software and associated documentation files (the         |
  | " Software " ) , to deal in the Software without restriction , including      |
;;; | without limitation the rights to use, copy, modify, merge, publish,     |
  | distribute , sublicense , and/or sell copies of the Software , and to       |
  | permit persons to whom the Software is furnished to do so , subject to    |
;;; | the following conditions:                                               |
;;; |                                                                         |
;;; | The above copyright notice and this permission notice shall be included |
  | in all copies or substantial portions of the Software .                   |
;;; |                                                                         |
  | THE SOFTWARE IS PROVIDED " AS IS " , WITHOUT WARRANTY OF ANY KIND ,          |
;;; | EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF      |
;;; | MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.  |
;;; | IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY    |
  | CLAIM , DAMAGES OR OTHER LIABILITY , WHETHER IN AN ACTION OF CONTRACT ,     |
;;; | TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE       |
;;; | SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.                  |
;;; +=========================================================================+

;;; Author: JP Massar. 

(defpackage :bbi
  (:nicknames :bbl-internals :bbli :biobike-internals)
  (:use :common-lisp :bioutils :utils :frames :webuser :biolisp)
  #+not-needed?
  (:shadowing-import-from :wlisp :defun)
  ;; for arrow notation in brackets
  (:import-from :utils :->)
  (:import-from :com.biobike.help :document-function)
  (:export :define-function :defconversion 
   :remove-conversion :show-defconversions :bbload)
  (:shadow :frame :gene :protein :contiguous-sequence :organism)
  )




 -*- mode: Lisp; Syntax: Common-Lisp; Package: cl-user; -*-
 +=========================================================================+
 |                                                                         |
 | Permission is hereby granted, free of charge, to any person obtaining   |
 | a copy of this software and associated documentation files (the         |
 | without limitation the rights to use, copy, modify, merge, publish,     |
 | the following conditions:                                               |
 |                                                                         |
 | The above copyright notice and this permission notice shall be included |
 |                                                                         |
 | EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF      |
 | MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT.  |
 | IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY    |
 | TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE       |
 | SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.                  |
 +=========================================================================+
 Author: JP Massar. 
 for arrow notation in brackets

(in-package :cl-user) 

  | Copyright ( c ) 2005 JP  ,   ,   ,      |
  | " Software " ) , to deal in the Software without restriction , including      |
  | distribute , sublicense , and/or sell copies of the Software , and to       |
  | permit persons to whom the Software is furnished to do so , subject to    |
  | in all copies or substantial portions of the Software .                   |
  | THE SOFTWARE IS PROVIDED " AS IS " , WITHOUT WARRANTY OF ANY KIND ,          |
  | CLAIM , DAMAGES OR OTHER LIABILITY , WHETHER IN AN ACTION OF CONTRACT ,     |


(defpackage :bbi
  (:nicknames :bbl-internals :bbli :biobike-internals)
  (:use :common-lisp :bioutils :utils :frames :webuser :biolisp)
  #+not-needed?
  (:shadowing-import-from :wlisp :defun)
  (:import-from :utils :->)
  (:import-from :com.biobike.help :document-function)
  (:export :define-function :defconversion 
   :remove-conversion :show-defconversions :bbload)
  (:shadow :frame :gene :protein :contiguous-sequence :organism)
  )



