Brain surgeon salary. Brain Surgeon in the US receives an annual income ranging from $108,004 to $729,606. The starting hourly rate for new brain surgeon is around $17.00 but this gradually increases as brain surgeon gains more experience. In fact, brain surgeons can collect a top hourly pay of $165.45.Brain surgeon’s salary is one the highest compared to others surgeons.he starting hourly rate for new brain surgeon is around $17.00 but this gradually increases as brain surgeon gains more experience. In fact, brain surgeons can collect a top hourly pay of $165.45. Brain surgeon’s salary is one the highest compared to others surgeons.