Drugs and Medications used to treat Pinworm: Note: You must always seek professional medical advice about any prescription drug, OTC drug, medication, treatment or change in treatment plans. Some of the different medications used in the treatment of Pinworm include: 1  Mebendazole. 2  Vermox. 3  Revapol. 4  Vermicol. 5  Vermidil. 6  Vermin. 7  Pyrantel Pamoate. 8  Combantrin.