Average Laboratory Technician Salaries. The average salary for laboratory technician jobs is $35,000. Average laboratory technician salaries can vary greatly due to company, location, industry, experience and benefits.This salary was calculated using the average salary for all jobs with the term laboratory technician anywhere in the job listing.verage Laboratory Technician Salaries. The average salary for laboratory technician jobs is $35,000. Average laboratory technician salaries can vary greatly due to company, location, industry, experience and benefits.