For example the median expected annual pay for a typical Aviation Manager in the United States is $159,851 so 50% of the people who perform the job of Aviation Manager in the United States are expected to make less than $159,851.Source: HR Reported data as of October 2015.Median $159,851.ob Description for Aviation Manager. Manages the operations of the aviation department. Ensures compliance with FAA regulations and that all maintenance, safety, and scheduling operations are executed satisfactorily.