Many microorganisms affect anaerobic digestion, including acetic acid-forming bacteria (acetogens) and methane-forming archaea (methanogens). These organisms promote a number of chemical processes in converting the biomass to biogas.any microorganisms affect anaerobic digestion, including acetic acid-forming bacteria (acetogens) and methane-forming archaea (methanogens). These organisms promote a number of chemical processes in converting the biomass to biogas.