Phlebotomy Salary per Hour. According to the U.S. Bureau of Labor Statistics, the average hourly wage was $15.10 in 2013. That mean annual wage was $31,410 for the same year. If you’re starting your career, you can expect between $10.46 and $12.27 hourly and $21,760 and $25,510 annually.or instance, a certified phlebotomy technician will get $15.93, which is more then the median $13.8 a non-certified individual earns. Meanwhile, a certified donor phlebotomist can expect up to $16.51 per hour.