▁deal ▁with ▁Duke ▁to ▁deliver ▁Cob ra ▁Commander . ▁Dest ro ▁is ▁trad ed ▁for ▁Cob ra ▁Commander , ▁but ▁not ▁before ▁the ▁Commander ▁sho ots ▁Haw k ▁in ▁the ▁back , ▁and ▁in ▁turn ▁is ▁shot ▁from ▁behind ▁by ▁the ▁Baron ess . ▁Cob ra ▁Commander ▁is ▁fre ed ▁by ▁the ▁D read n oks , ▁and ▁revealed ▁to ▁have ▁been ▁Z art an ▁in ▁dis gu ise . ▁ ▁Cob ra ▁Commander ▁takes ▁back ▁complete ▁control ▁of ▁Cob ra , ▁and ▁sends ▁a ▁unit ▁to ▁destroy ▁The ▁Pit , ▁as ▁Cob ra ▁disco vers ▁a ▁weather ▁control ▁weapon ▁named ▁the ▁Temp est , ▁and ▁moves ▁it ▁to ▁their ▁new ▁Mon ol ith ▁Base ▁in ▁Bad h ik stan . ▁Cob ra ▁uses ▁the ▁Temp est ▁to ▁un le ash ▁the ▁Death angel ▁Vir us ▁on ▁the ▁county ▁of ▁Bad hi , ▁as ▁G . I . ▁Joe ▁attacks ▁Cob ra ' s ▁new ▁strong hold . ▁Cob ra ▁Commander ▁esc apes , ▁but ▁not ▁before ▁shooting ▁Dr . ▁Mind b ender , ▁who ▁dies ▁helping ▁G . I . ▁Joe ▁to ▁disable ▁the ▁Temp est . ▁The ▁Red ▁Sh adows ▁organization ▁then ▁steps ▁forward , ▁target ing ▁members ▁of ▁both ▁G . I . ▁Joe ▁and ▁Cob ra . ▁They ▁are ▁defeated ▁by ▁G . I . ▁Joe , ▁and ▁the ▁team ▁is ▁then ▁de activ ated ▁by ▁order ▁of ▁the ▁President , ▁given ▁that ▁Cob ra ▁as ▁an ▁organization ▁has ▁f ract ured , ▁although ▁Cob ra ▁Commander ▁remains ▁at