until the year 2000 , research into the specific attributes of the serotonin pathway and its role in neuro - psychiatric disorders disorders was double that of other aspects of tryptophan metabolism.5 experimental tryptophan depletion tests were devised to ascertain the influence of serotonin metabolism on cognition , mood and behavior . 57 brief tryptophan depletion tests in normal human subjects , for example , provided consistent evidence for its role in impaired memory consolidation and reduced visual perception.7,8 older studies of prolonged dietary depletion of both tryptophan and niacin were known to lead to severe pellagra , with neurological and extensive inflammatory mucosal membrane changes . these occurred within one to two months of a depleted diet.9 in recent decades , however , the involvement of this essential amino acid in the kynurenine pathway has been elucidated.5,10 this has in part explained some of the pathological processes of pellagra . protein catabolism had long been recognized as the big picture metabolic response to all noxious bodily stimuli such as trauma , infection and neoplastic processes . upon further analysis of the separate amino - acid constituents of proteins , the degradation of tryptophan emerged as a major contributor to the catabolic process,7,1014 amongst its other critical functions such as neuromodulation . the intimate relationship in the kynurenine pathway between tryptophan , gamma - interferon and 2 - 3-dioxygenase ( ido ) as an immuno - modulatory mechanism has since been substantiated . 10,15 the kynurenine pathway is also linked to the synthesis of nicotinamide adenine dinucleotide ( nad ) from quinolinic acid , and it is up - regulated by neurodegenerative and other inflammatory triggers . 10 this discovery of the existence of two tryptophan metabolic pathways in the cns and peripheral nervous system has challenged researchers to discriminate between the consequences activation of these dual paths.1014 there have been subsequent advances in technologies , such as developments in magnetic resonance imaging ( mri ) and positron emission tomography ( pet),16 as well as an increased range of available biochemical and genetic tests.10 these newer techniques have generated data from specialist molecular biologists at cellular and micrometabolic levels . this sophisticated phase of research has increased our understanding of the physiological mechanisms that underpin basic principles and observations in medicine . the information is extremely complex , and there tends to be a time lag before it is incorporated into clinical application . the gastrointestinal tract is the nutrient gateway to the body and little is known about tryptophan activity in this area . resultant physical defects from tryptophan depletion can range from mild to severe and can be hard to detect and interpret.17,18 tryptophan absorption1922 and metabolic utilization23 are vulnerable to both primary inborn genetic errors and secondary gut disturbances . in addition , there are several inherited autoimmune diseases of the bowel that affect absorption , such as celiac and crohns disease.5,17,18 these conditions usually do not become apparent until adulthood . case reports of intestinal autoantibodies to tryptophan hydroxylase have occurred in adults , associated with bowel dysfunction and other systemic autoimmune disorders.2427 at the present time , these various conditions are not completely understood . sabator and ricos28 reported the presence of kynurenine irregularities in 5% of 830 institutionalized children with mental retardation . other primary abnormalities of childhood29 33 including tryptophanol glycine absorption disorder23 have subsequently been documented . hartnup disease is an autosomal recessive condition that is no longer included in neonatal screening programs.34,35 this disease is thought to have the same community prevalence as phenylketonuria . the physical phenomena resembling pellagra36 in hartnups disease responds to treatment with either nicotinamide or neomycin . the potential connection between the kynurenine pathway and cfs was initially made in 199138 and with fm in 1993.39 this hypothesis was recently revived as more evidence of tryptophan pathway dysfunction in cfs / fm has since accrued.40,41 cfs/ fm could involve serum tryptophan level deficiency , 42,43 and impaired immune - modulatory function has been demonstrated at the gamma - interferon , ido stage of metabolism.38,44 in addition , there appears to be some resemblance between cfs / fm irregularities and those found in other medical conditions.45,46 there is a consistent , recurring pattern of core symptoms in affected populations.4749 some physicians prefer the hybrid classification of overlap syndrome , whereas a few patient support groups opt for the term myalgic encephalomyelitis ( me ) . uncertain fluctuations in the course and outcomes of individual patients confound some aspects of scientific analysis . the signs and symptoms of the condition are well documented in the specialist cfs / fm literature.4749 patients present with extreme exhaustion , which is aggravated by exertion and altered sleep patterns . concentration and memory is impoverished45,50,51 and patients experience visual disturbances48,49 and unfathomable pain.5,48,49 they may suffer inexplicable gastrointestinal and urogenital tract discomforts.27,52,53 amongst less obvious symptoms are ataxia , myopathy , lowered thyroid and cortisol levels , food intolerances and puzzling skin conditions.4749 in 1975 , moldofsky and colleagues54 looked to serotonin in an attempt to explain the  nonrestorative sleep syndrome  of fibrositis ( later termed fibromyalgia ) . in a 1978 study , patients tryptophan levels were noted to be lowered.42 this observation was repeated by yunus and colleagues55 in 1992 . russel and colleagues discovered an abnormality in the conversion stage of 3-hydroxy kynurenine in the cns in fm patients.39,48 since then , research into the attributes of tryptophan in the context of cfs / fm has continued.42,43,56,57 a couple of subsequent studies examined amino acid urinary profiles and other biochemical parameters in cfs patients and controls , without specific mention of tryptophan.58,59 there are several possible explanations for the observed decrease in tryptophan levels in cfs / fm patients . this decrease may be due to any primary genetic disorder , or may be due to malabsorptions created by an idiopathic irritable bowel syndrome,52,53 food intolerances , bacterial overgrowth and other bowel disorders.16,17 silent or chronic infections can increase metabolic demands for tryptophan and vitamin b12 . these listed observations imply that tryptophan , nicotinamide and b12 deficiencies can become a complication of cfs / fm.40,42,6063 evidence for the requirement of l - carnitine , zinc42 and intravenous vitamin solutions64 is circumstantial . this question of nutrient substrate deficiency warrants investigation along formal medical protocols rather than the less structured methods of complementary and alternative medicine models . it is also important to establish if there is a point at which the decline in available metabolic fuel reaches a critical level and structural morphological damage becomes irreversible , leading to chronically impaired health . cfs / fm has , in part , been recognized as an immune deficiency syndrome.4749,65 bell47 was at a loss to explain the immunological profile of the cfs / fm patient ; however , he appreciated that it was still early days in the field of cytokine research . he divided the observed irregularities into categories , based on either overactivity or underactivity of the immune system . underactivity was reflected in a decreased number and function of natural killer cells,6567 a decreased mitogen response and decreased antibody levels , particularly in the igg subclasses , in response to infections . in contrast , up - regulation or overactivity of the immune system involved elevated levels of gamma - interferon and other cytokines . he later considered whether the prolonged malaise observed in cfs could be due to the persistence of infection caused by impaired patient immunity.65 he suggested that another factor might involve failure of an initial immune defense response by the host , leading the host to shut down and therefore be unable to proceed along the pathway of resolution . lloyd and colleagues67 had already documented aspects of  disordered immune regulation  in 1989 in their cfs patients . they discovered that this abnormality related to the host response and could not be attributed to any specific viral infectious agent . they were aware that the therapeutic use of interferons in other medical conditions could produce severe cfs - like symptoms as a side effect.69 they anticipated that gamma - interferon would be implicated in cfs illness complications . they detected the continued presence of the alpha - tumor necrosis factor and gamma - interferon in both the acute and convalescent phases of this infection . 67,7073 this feature might , in addition , explain the presence of under - recognized neuropathic pain of subclinical zoster sine herpete74 and of any other infectious and avitaminotic states in cfs / fm patients.4,5 contemporary tryptophan research examines the up - regulation of the kynurenine pathway by neurological and psychiatric disorders and autoimmune , neoplastic and infectious diseases . the ultimate aims of these studies are to further the understanding of the neurological consequences of these illnesses and to improve their treatment prospects.7,1014 there are comparative clusters of signs and symptoms in both patients with cfs / fm and in those whose conditions relate predominantly to the kynurenine pathway . thus , cfs / fm patients could benefit from investigations searching for primary errors of tryptophan metabolism and other kynurenine pathway pathologies.10,34,60 in 1986 , mersky75 stated that  a lack of adequate technology and a proper unwillingness to undertake hazardous investigations for obscure symptoms may encourage a false attribution of psychological symptoms to physical illness  .
last century there was a short burst of interest in the tryptophan related disorders of pellagra and related abnormalities that are usually presented in infancy.1,2 nutritional physiologists recognized that a severe human dietary deficiency of either tryptophan or the b group vitamins could result in central nervous system ( cns ) sequelae such as ataxia , cognitive dysfunction and dysphoria , accompanied by skin hyperpigmentation.3,4 the current paper will focus on the emerging role of tryptophan in chronic fatigue syndrome ( cfs ) and fibromyalgia ( fm ) .