a total of 500 adolescents ( mean age 13.2 years , sd : 1.5 ) were enrolled in the study undertaken in ghana in 2009 ( 9 ) . after 2 years , 397 ( 79.4% ) concomitantly , we analyzed clinically and microbiologically a subpopulation consisting of 98 of these school children during 6 working days . each day after the clinical registrations , 1520 children were consecutively selected for the present study and microbiological sampling . of these 98 adolescents from six different schools in the suburban area of accra , ghana , 52 ( 53.1% ) were girls . twelve of the adolescents ( seven girls and five boys ) were recruited from one private school , and the remaining 86 were from five public schools . detailed information on the study population , demographics , and ethics , including signed consents by parents has been reported on previously ( 9 , 10 ) . knowledge on the socioeconomic status , the medical health status , and the intake of antibiotics within the past 3 months before the examination are available from the studies by berg and co - workers ( 9 , 10 ) . if any children were medically diseased or had had received antibiotics during the past 3 months , they were excluded from the present study . the adolescents were given a full - mouth re - examination , including recording of cal and ppd in the year 2011 , and subsequently the change of cal from the year 2009 until 2011 was calculated . the clinical measurements were performed by the same periodontist ( ch ) who performed the measurements at baseline ( 9 ) as well as in the total group of adolescents participating in the 2-year follow - up ( 10 ) . bacterial sampling was carried out using the paper point technique at four sites , that is , the mesial aspect of 46 , 11 , 26 , and 31 as separate samples from each site . the paper points were transferred to eppendorf tubes containing 100 l te - buffer ( 10 mm tris hcl , 1 mm edta , ph 7.6 ) to which 100 l of 0.5 m naoh was added , mixed , and kept cold for further transportation to the laboratory at the department of oral microbiology , university of gothenburg , gteborg , sweden . after reaching the laboratory , the samples were boiled and 800 l 5 m ammonium acetate was added to each tube . the bacterial samples were analyzed with the checkerboard dna  dna hybridization method against 10 bacterial probes from species commonly associated with periodontitis ( in caucasians ) : a. actinomycetemcomitans ( two probes , one against a non - jp2 genotype strain fdc y4 and one against a jp2 genotype strain omgsp47/12 ) , the red complex bacteria ( 11 ) 
 porphyromonas gingivalis ( omgs 2860 ) , tannerella forsythia ( strain atcc 43037 ) , treponema denticola ( strain omgs 3271 ) , and the orange complex bacteria ( 11 ) 
 campylobacter rectus ( strain atcc 33238 ) , fusobacterium nucleatum ( strain atcc 10953 ) , prevotella intermedia ( strain atcc 25611 ) , and filifactor alocis ( ccug 47790 ) , as well as porphyromonas endodontalis strain omgs 1205 ( 13 , 14 ) . the probes were digoxigenin - labeled whole genomic probes prepared by random priming , using the high - prime labeling kit ( roche diagnostics , mannheim , germany ) from the strains of the panel . the hybrids formed between the bacterial dna and the probes were detected by the application of an anti - deoxygenin antibody conjugated with alkaline phosphatase and incubated with a chemiluminescent substitute ( cdp - star , roche diagnostics ) . the evaluation of the signal was performed at a lumiimager workstation ( boehringer - mannheim , mannheim , germany ) by comparing the signals obtained with those of pooled standard samples containing 10 ( high standard ) or 10 ( low standard ) of each of the 10 bacterial species , and the amount ( cell number ) of each bacterial species in each sample was calculated . the sensitivity of the whole genomic probes constructed as above has been described previously and was set to 10 
 ( 15 ) . the specificity ( cross - hybridization ) of each probe was checked separately against all 10 bacterial strains included in the panel . the prevalence and the mean cell number were calculated for the bacterial species in each sample . pearson 's correlation coefficients were calculated for each bacterial species with regard to the difference in cal between the years 2009 and 2011 at individual and at site level , as well as ppd at the sampled sites . linear regression analysis was also applied stepwise , and a final model was constructed for the dependent variable cal at the individual level . variables included in the model were age , sex , type of the school that the children attended , p. gingivalis , and p. intermedia . a total of 500 adolescents ( mean age 13.2 years , sd : 1.5 ) were enrolled in the study undertaken in ghana in 2009 ( 9 ) . after 2 years , 397 ( 79.4% ) concomitantly , we analyzed clinically and microbiologically a subpopulation consisting of 98 of these school children during 6 working days . each day after the clinical registrations , 1520 children were consecutively selected for the present study and microbiological sampling . of these 98 adolescents from six different schools in the suburban area of accra , ghana , 52 ( 53.1% ) were girls . twelve of the adolescents ( seven girls and five boys ) were recruited from one private school , and the remaining 86 were from five public schools . detailed information on the study population , demographics , and ethics , including signed consents by parents has been reported on previously ( 9 , 10 ) . knowledge on the socioeconomic status , the medical health status , and the intake of antibiotics within the past 3 months before the examination are available from the studies by berg and co - workers ( 9 , 10 ) . if any children were medically diseased or had had received antibiotics during the past 3 months , they were excluded from the present study . the adolescents were given a full - mouth re - examination , including recording of cal and ppd in the year 2011 , and subsequently the change of cal from the year 2009 until 2011 was calculated . the clinical measurements were performed by the same periodontist ( ch ) who performed the measurements at baseline ( 9 ) as well as in the total group of adolescents participating in the 2-year follow - up ( 10 ) . bacterial sampling was carried out using the paper point technique at four sites , that is , the mesial aspect of 46 , 11 , 26 , and 31 as separate samples from each site . the paper points were transferred to eppendorf tubes containing 100 l te - buffer ( 10 mm tris hcl , 1 mm edta , ph 7.6 ) to which 100 l of 0.5 m naoh was added , mixed , and kept cold for further transportation to the laboratory at the department of oral microbiology , university of gothenburg , gteborg , sweden . after reaching the laboratory , the samples were boiled and 800 l 5 m ammonium acetate was added to each tube . the bacterial samples were analyzed with the checkerboard dna  dna hybridization method against 10 bacterial probes from species commonly associated with periodontitis ( in caucasians ) : a. actinomycetemcomitans ( two probes , one against a non - jp2 genotype strain fdc y4 and one against a jp2 genotype strain omgsp47/12 ) , the red complex bacteria ( 11 ) 
 porphyromonas gingivalis ( omgs 2860 ) , tannerella forsythia ( strain atcc 43037 ) , treponema denticola ( strain omgs 3271 ) , and the orange complex bacteria ( 11 ) 
 campylobacter rectus ( strain atcc 33238 ) , fusobacterium nucleatum ( strain atcc 10953 ) , prevotella intermedia ( strain atcc 25611 ) , and filifactor alocis ( ccug 47790 ) , as well as porphyromonas endodontalis strain omgs 1205 ( 13 , 14 ) . the probes were digoxigenin - labeled whole genomic probes prepared by random priming , using the high - prime labeling kit ( roche diagnostics , mannheim , germany ) from the strains of the panel . the hybrids formed between the bacterial dna and the probes were detected by the application of an anti - deoxygenin antibody conjugated with alkaline phosphatase and incubated with a chemiluminescent substitute ( cdp - star , roche diagnostics ) . the evaluation of the signal was performed at a lumiimager workstation ( boehringer - mannheim , mannheim , germany ) by comparing the signals obtained with those of pooled standard samples containing 10 ( high standard ) or 10 ( low standard ) of each of the 10 bacterial species , and the amount ( cell number ) of each bacterial species in each sample was calculated . the sensitivity of the whole genomic probes constructed as above has been described previously and was set to 10 
 ( 15 ) . the specificity ( cross - hybridization ) of each probe was checked separately against all 10 bacterial strains included in the panel . the prevalence and the mean cell number were calculated for the bacterial species in each sample . pearson 's correlation coefficients were calculated for each bacterial species with regard to the difference in cal between the years 2009 and 2011 at individual and at site level , as well as ppd at the sampled sites . linear regression analysis was also applied stepwise , and a final model was constructed for the dependent variable cal at the individual level . variables included in the model were age , sex , type of the school that the children attended , p. gingivalis , and p. intermedia . table 1 shows the characteristics of the 397 ghanaian adolescents , being the whole group examined at the 2-year follow - up in 2011(10 ) , and those examined for the present study ( n=98 ) . the subgroup used in the present study did not differ from the 2-year follow - up ( n=397 ) , except for a lower number of children attending private schools ( 12.2% vs. 32.5% ) . characteristics of the 397 ghanaian adolescents examined at the 2-year follow - up and those examined for the present study ( n=98 ) from berg et al . ( table 2 shows the detection frequency of nine bacterial species at four sampled sites and at subject level ( based on the presence in one or more out of a maximum of four sampled sites in a total of four samples ) . f. nucleatum and p. intermedia were found in almost all subjects ( > 99% ) and in addition found as the highest number of cells . also , c. rectus , f. alocis , and p. endodontalis were detected quite frequently , while the detection frequency of the three red complex bacteria , p. gingivalis , t. forsythia , and t. denticola was lower both at subject level and at site level in particular . the prevalence of nine bacterial species in individuals and at sampled sites based on the presence in at least one of four samples . the dna probe against the jp2 clone cross - reacted fully with the non - jp2 genotypes of a. actinomycetemcomitans . further calculations on a. actinomycetemcomitans and clinical variables were based on the non - jp2 probe . the detection frequency of a. actinomycetemcomitans was < 50% at both subject and site level . the correlation between bacterial variables and the total change of cal during the 2-year follow - up ( over all sites measured ) , the change of cal and of ppd at sampled sites , respectively , was calculated ( table 3 ) . a strong correlation between p. intermedia and the total change of cal during the 2 years over all sites measured was found ( p0.01 ) . p. intermedia and p. gingivalis also correlated strongly with the change of cal ( p0.001 and p0.01 , respectively ) and change of ppd ( p0.01 and p0.01 , respectively ) of the sampled sites during the 2 years . age and gender did not correlate with the clinical parameters ( data not shown ) . correlations coefficients ( pearson 's ) between bacterial variables and the total change in cal * , change of cal and change of ppd at the four sampled sites cal difference between 2009 and 2011 . by use of the linear regression model , we wanted to identify explanatory factors for a difference in cal at subject level between 2009 and 2011 . the two bacterial species , p. gingivalis and p. intermedia were included in the model due to significant correlations with cal in contrast to the other bacterial species mentioned in table 3 . p. intermedia ( p0.05 ) and type of school ( p0.05 ) , but neither p. gingivalis nor sex and age came out as significant discriminating factors in the model . the present study 's aim was to describe the subgingival bacterial profile using the checkerboard technique on samples from ghanaian adolescents with a high frequency of periodontal attachment loss . a strong correlation was seen between p. intermedia and p. gingivalis with a retrospective loss of cal as well as cal at the sampled sites . p. intermedia turned out to be a significant factor in a regression model designed to find explanatory factors for cal . private schools seemed ( although the limited number of adolescents ) also to have a significant influence on cal , while age and sex did not seem to influence cal . a. actinomycetemcomitans did not , to some surprise , show any association with cal in the present study group using the we recently reported that the presence of both the jp2 and non - jp2 genotypes of a. actinomycetemcomitans was strongly associated with the onset and progression of al in the whole group of ghanaian adolescents of which the present study group constitutes a subgroup ( 10 ) . in the baseline study , a. actinomycetemcomitans was identified by polymerase chain reaction ( pcr ) as the only bacterial species studied . a distinction between non - jp2 and jp2 genotypes of a. actinomycetemcomitans was also made . both pcr and selective culturing are sensitive methods detecting the target bacteria in much lower cell numbers than the checkerboard method for which an estimated detection limit of 10 cells has been calculated ( 15 ) . the microbiological data of the progression study ( 10 ) were collected 2 years earlier at baseline , whereas the microbiological data for the checkerboard analysis were collected 2 years later , where the periodontal status had progressed in many individuals . it is our experience , also noticed in the literature , a. actinomycetemcomitans is generally present in low amounts in advanced periodontitis in adults using culture , checkerboard technique , and real - time pcr , presumably due to a change over time of the microbiota from being more aerobic and facultative anaerobic to becoming gradually more anaerobic ( 11 , 16 , 17 ) . it should be pointed out that a. actinomycetemcomitans is a facultative bacteria that is probably competitive in the early phase of gingival crevice colonization / infection . based on a previous study ( 10 ) , a. actinomycetemcomitans seems to be predictively related to the cal , and in particular the jp2 genotype . concomitantly , anaerobes are established in the subgingival plaque flora and may out - compete the facultative bacterial species as a result of the changing environment in the deepening gingival / periodontal pocket . the predominant bacteria ( p. intermedia and f. nucleatum ) in the present study are supporting this . p. intermedia constituted an important factor and correlated strongly with total cal change and cal and ppd change at sampled sites . this supports the fact that during the progression of periodontitis , the infection changes its character from being highly associated with a. actinomycetemcomitans , the jp2 genotype in particular , to a more anaerobic and polymicrobial type of infection . it is interesting to note that p. intermedia independently of other bacteria in the panel showed an association with cal , which indicates that this species may have a certain impact on the progression . it is suggested that such lesions may change its ecological character and the aggressive phase of the periodontitis turns into a more chronic type . several anaerobic bacterial species were present frequently in high numbers in samples from individuals with or without aggressive periodontitis . on the contrary , bacterial species , such as p. gingivalis , t. forsythia , and t. denticola , (  red complex species ) showed a comparatively lower detection frequency and amounts . the participants in the present study were young ( 1319 years of age ) , and it is claimed that these  putative pathogens or red complex bacteria do not occur in detectable amounts until after puberty in various populations ( 1821 ) . overgrow the remaining parts of the flora , even in older individuals ( 1719 years of age ) or in those that showed cal and deep periodontal pockets already at baseline . it is a possibility that the population of ghana has a different microbiological profile compared to the profile in caucasians or asians . the prevalence of the investigated species is similar to results reported in studies based on adults from china , thailand , and sweden ( 2224 ) using the same checkerboard dna  dna hybridization technique , although the amount of these species was lower in the present study . few studies have been performed trying to evaluate the prevalence of  putative periodontopathogens in populations of the sub - saharan part of africa ( 9 ) . most studies performed in other populations are done on adults , while studies on children are rare ( 25 ) . two other studies on aggressive periodontitis in young individuals but in other populations ( afro - americans in florida and from brazil ) have shown higher levels of anaerobes , for example , p. gingivalis , f. alocis , and parvimonas micra ) ( 26 , 27 ) . the only known study in the african population is the study from morocco based on young individuals with aggressive periodontitis ( 6 , 8 , 28 ) . it was concluded that the jp2 clone of a. actinomycetemcomitans constitutes a minor proportion of the complex subgingival microbiota in patients with active disease . a recent study also emphasized the remarkably high concentrations of antibodies against the a. actinomycetemcomitans leukotoxin , which may indicate that the disease activity was terminated (  burned out ) in some patients with aggressive periodontitis and that such individuals may develop immunity to aggressive periodontitis ( 29 ) . however , it was disclosed that representative species from seven different phyla and the bacterial species ( including a. actinomycetemcomitans ) evaluated in that study probably constituted a minor part of the flora . the study also showed great subject heterogeneity between the proportions of clones within these seven phyla ( 27 ) . a correlation between the change of cal and those subjects attending public schools compared to those attending private schools was found ( 9 ) . similar to children in public schools , the children from private schools were low in periodontopathogens ( red complex ) , which indicates that as long as they are periodontally healthy they are having a low tendency for the colonization with these bacteria , including the detection of a. actinomycetemcomitans at a relatively low level . children from private schools were too few in the present study to evaluate whether they are generally less colonized with the red complex bacteria and a. actinomycetemcomitans before periodontal attachment loss starts . it is not known which factors particularly predispose the public school children to appear with cal at such a high rate in their adolescence . the same was found for the much greater cohort of 397 children published elsewhere ( 10 ) . it may be related to some social or genetic factor , and the present study does not support that a microbiological factor would be involved . this study indicates a close relation between the presence of anaerobic oral bacterial species and periodontal breakdown in ghanaian adolescents , and furthermore indicates that some species , such as p. intermedia , may have a significant association with aggressive periodontitis in this young ghanaian population . once periodontitis has developed , the character of the periodontal infection may change over time from an infection primarily associated with a. actinomycetemcomitans into a more anaerobic polymicrobial type of infection .
objectivethis study describes subgingival bacterial profiles associated with clinical periodontal status in ghanaian adolescents with or without progression of attachment loss.materials and methodsamong 500 adolescents included in a cohort study , 397 returned 2 years later for a periodontal re - examination , including full - mouth cal measurements . at follow - up 
 , a subgroup of 98 adolescents was also subjected to bacterial sampling with paper points at four periodontal sites ( mesial aspect of 11 , 26 , 31 , and 46 ) and analyzed with the checkerboard dna  dna hybridization technique against dna - probes from nine periodontitis - associated bacterial species.resultsthe 98 ghanaian adolescents examined in the present study were similar to the entire group examined at the 2-year follow - up with respect to age , gender , and cal 3 mm . 
 a high detection frequency of fusobacterium nucleatum and prevotella intermedia ( > 99% ) using checkerboard analysis was found , while for aggregatibacter actinomycetemcomitans the detection frequency was < 50% . 
 a strong correlation was found at the individual level between the presence of p. intermedia and the total cal change , and p. intermedia and porphyromonas gingivalis were strongly correlated with a change in cal and probing pocket depth ( ppd ) at the sampled sites . in a linear regression model , a significant discriminating factor for the total cal change in the dentition during the 2-year follow - up period was obtained for p. intermedia and public school.conclusionthis study indicates that subgingival bacterial species other than a. actinomycetemcomitans , for example , p. intermedia , have a significant association with periodontal breakdown ( change in cal ) in ghanaian adolescents with progression of periodontal attachment loss .