<?xml version='1.0' encoding='utf-8'?>
<toolbox>
    <section id="secim" name="SECIM Tools">
        <tool file="secimtools/anova.xml"/>
        <tool file="secimtools/baPlot.xml"/>
        <tool file="secimtools/BFF.xml"/>
        <tool file="secimtools/clean.xml"/>
        <tool file="secimtools/countDigits.xml"/>
        <tool file="secimtools/CVflag.xml"/>
        <tool file="secimtools/distribution.xml"/>
        <tool file="secimtools/dropFlag.xml"/>
        <tool file="secimtools/log_transform.xml"/>
        <tool file="secimtools/mergeFlags.xml"/>
        <tool file="secimtools/onOff.xml"/>
        <tool file="secimtools/pypca.xml"/>
        <tool file="secimtools/peak_compare.xml"/>
        <tool file="secimtools/RandomForest.xml"/>
        <tool file="secimtools/RTflag.xml"/>
        <tool file="secimtools/runOrderRegression.xml"/>
        <tool file="secimtools/scatterPlot3D.xml"/>
        <tool file="secimtools/scatterPlot.xml"/>
        <tool file="secimtools/SVM_classifier.xml"/>
        <tool file="secimtools/onOff.xml"/>
        <tool file="secimtools/standardizedEuclideanDistance.xml"/>
    </section>
</toolbox>

<?xml version='1.0' encoding='utf-8'?>
<toolbox>
    <section id="secim" name="SECIM Tools">
        <tool file="secimtools/anova.xml"/>
        <tool file="secimtools/baPlot.xml"/>
        <tool file="secimtools/BFF.xml"/>
        <tool file="secimtools/clean.xml"/>
        <tool file="secimtools/countDigits.xml"/>
        <tool file="secimtools/CVflag.xml"/>
        <tool file="secimtools/distribution.xml"/>
        <tool file="secimtools/dropFlag.xml"/>
        <tool file="secimtools/log_transform.xml"/>
        <tool file="secimtools/mergeFlags.xml"/>
        <tool file="secimtools/onOff.xml"/>
        <tool file="secimtools/pypca.xml"/>
        <tool file="secimtools/RandomForest.xml"/>
        <tool file="secimtools/RTflag.xml"/>
        <tool file="secimtools/runOrderRegression.xml"/>
        <tool file="secimtools/scatterPlot3D.xml"/>
        <tool file="secimtools/scatterPlot.xml"/>
        <tool file="secimtools/SVM_classifier.xml"/>
        <tool file="secimtools/onOff.xml"/>
        <tool file="secimtools/standardizedEuclideanDistance.xml"/>
    </section>
</toolbox>

Remove misisng peak_compare.xml from the tool confg
Remove misisng peak_compare.xml from the tool confg
