<?xml version="1.0"?>
<tool_dependency>
    <package name="ea-utils" version="0.1.0">
        <install version="1.0">
            <actions_group>
                <!-- Download the binaries -->
                <actions os="linux" architecture="x86_64">
                    <action type="shell_command">svn checkout http://ea-utils.googlecode.com/svn/trunk/ ea-utils</action>
                    <action type="change_directory">ea-utils/clipper/</action>
                    <action type="shell_command">make</action>
                    <action type="move_file">
                        <source>fastq-join</source>
                        <destination>$INSTALL_DIR</destination>
                    </action>
                </actions>

                <!-- This actions tag is only processed if none of the above tags resulted in a successful installation. -->
                <actions>
                    <action type="shell_command">echo "ERROR: Automated installation is currently not supported."</action>
                    <action type="shell_command">echo "Please report this via https://github.com/ASaiM/galaxytools/issues - thank you!"</action>
                    <action type="shell_command">false</action>
                    <!-- The 'false' command will return an error, so Galaxy should treat this as a failed install -->
                </actions>

                <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. -->
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
    </package>
</tool_dependency>
<?xml version="1.0"?>
<tool_dependency>
    <package name="ea-utils" version="0.1.0">
        <install version="1.0">
            <actions_group>
                <!-- Download the binaries -->
                <actions os="linux" architecture="x86_64">
                    <action type="shell_command">svn checkout http://ea-utils.googlecode.com/svn/trunk/ ea-utils</action>
                    <!--<action type="change_directory">ea-utils/clipper/</action>-->
                    <action type="shell_command">cd ea-utils/clipper/ &amp;&amp; make</action>
                    <action type="move_file">
                        <source>ea-utils/clipper/fastq-join</source>
                        <destination>$INSTALL_DIR</destination>
                    </action>
                </actions>

                <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. -->
                <action type="set_environment">
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
                </action>
            </actions_group>
        </install>
    </package>
</tool_dependency>
Change tool dependencies for fastq-join
Change tool dependencies for fastq-join
