{
  "name": "pseudoreplicator",
  "title": "ENCODE TF ChIP-seq Pseudoreplicator",
  "summary": "Take a tagAlign or BEDPE file and generate two pseudoreplicates",
  "dxapi": "1.0.0",
  "version": "0.0.1",
  "categories": [
    "ENCODE Analysis Pipeline"
  ],
  "inputSpec": [
    {
      "name": "input_tags",
      "label": "File of mapped reads from which to sample",
      "class": "file",
      "optional": false
    }
  ],
  "outputSpec": [
    {
      "name": "pseudoreplicate1",
      "label": "Pseudoreplicate 1",
      "class": "file"
    },
    {
      "name": "pseudoreplicate2",
      "label": "Pseudoreplicate 2",
      "class": "file"
    }
  ],
  "runSpec": {
    "interpreter": "python2.7",
    "file": "src/pseudoreplicator.py"
  },
  "access": {
    "network": [
      "*"
    ]
  },
  "authorizedUsers": []
}

{
  "name": "pseudoreplicator",
  "title": "ENCODE TF ChIP-seq Pseudoreplicator",
  "summary": "Take a tagAlign or BEDPE file and generate two pseudoreplicates",
  "dxapi": "1.0.0",
  "version": "0.0.1",
  "categories": [
    "ENCODE Analysis Pipeline"
  ],
  "inputSpec": [
    {
      "name": "input_tags",
      "label": "File of mapped reads from which to sample",
      "class": "file",
      "optional": false
    }
  ],
  "outputSpec": [
    {
      "name": "pseudoreplicate1",
      "label": "Pseudoreplicate 1",
      "class": "file"
    },
    {
      "name": "pseudoreplicate2",
      "label": "Pseudoreplicate 2",
      "class": "file"
    }
  ],
  "runSpec": {
    "interpreter": "python2.7",
    "file": "src/pseudoreplicator.py",
    "systemRequirements": {
      "main":     {"instanceType": "mem3_hdd2_x8"}
    }
  },
  "access": {
    "network": [
      "*"
    ]
  },
  "authorizedUsers": []
}

Add resources to pseudoreplicator instance
Add resources to pseudoreplicator instance
