Title: Cellulyzer - Automated analysis and interactive visualization/simulation of select cellular processes,
Abstract: Here we report on a set of programs developed at the ZMBH Bio-Imaging
Facility for tracking real-life images of cellular processes. These programs
perform 1) automated tracking; 2) quantitative and comparative track analyses
of different images in different groups; 3) different interactive visualization
schemes; and 4) interactive realistic simulation of different cellular
processes for validation and optimal problem-specific adjustment of image
acquisition parameters (tradeoff between speed, resolution, and quality with
feedback from the very final results). The collection of programs is primarily
developed for the common bio-image analysis software ImageJ (as a single Java
Plugin). Some programs are also available in other languages (C++ and
Javascript) and may be run simply with a web-browser; even on a low-end Tablet
or Smartphone. The programs are available at
this https URL