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OpenPath

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  1. .DS_Store +0 -0
  2. DigestPath_test/DigestPath_test.csv +0 -0
  3. DigestPath_test/DigestPath_test_image_embeddings.npy +3 -0
  4. DigestPath_test/DigestPath_test_image_embeddings_normalized.npy +3 -0
  5. DigestPath_test/DigestPath_test_text_embeddings.npy +3 -0
  6. DigestPath_test/DigestPath_test_text_embeddings_normalized.npy +3 -0
  7. DigestPath_train/DigestPath_train.csv +0 -0
  8. DigestPath_train/DigestPath_train_image_embeddings.npy +3 -0
  9. DigestPath_train/DigestPath_train_image_embeddings_normalized.npy +3 -0
  10. DigestPath_train/DigestPath_train_text_embeddings.npy +3 -0
  11. DigestPath_train/DigestPath_train_text_embeddings_normalized.npy +3 -0
  12. Kather_test/Kather_test.csv +0 -0
  13. Kather_test/Kather_test_image_embeddings.npy +3 -0
  14. Kather_test/Kather_test_image_embeddings_normalized.npy +3 -0
  15. Kather_test/Kather_test_text_embeddings.npy +3 -0
  16. Kather_test/Kather_test_text_embeddings_normalized.npy +3 -0
  17. Kather_test/try.py +19 -0
  18. Kather_train/Kather_train.csv +0 -0
  19. Kather_train/Kather_train_image_embeddings.npy +3 -0
  20. Kather_train/Kather_train_image_embeddings_normalized.npy +3 -0
  21. Kather_train/Kather_train_text_embeddings.npy +3 -0
  22. Kather_train/Kather_train_text_embeddings_normalized.npy +3 -0
  23. PanNuke_test/PanNuke_test.csv +0 -0
  24. PanNuke_test/PanNuke_test_image_embeddings.npy +3 -0
  25. PanNuke_test/PanNuke_test_image_embeddings_normalized.npy +3 -0
  26. PanNuke_test/PanNuke_test_text_embeddings.npy +3 -0
  27. PanNuke_test/PanNuke_test_text_embeddings_normalized.npy +3 -0
  28. PanNuke_train/PanNuke_train.csv +0 -0
  29. PanNuke_train/PanNuke_train_image_embeddings.npy +3 -0
  30. PanNuke_train/PanNuke_train_image_embeddings_normalized.npy +3 -0
  31. PanNuke_train/PanNuke_train_text_embeddings.npy +3 -0
  32. PanNuke_train/PanNuke_train_text_embeddings_normalized.npy +3 -0
  33. WSSS4LUAD_binary_test/WSSS4LUAD_binary_test.csv +0 -0
  34. WSSS4LUAD_binary_test/WSSS4LUAD_binary_test_image_embeddings.npy +3 -0
  35. WSSS4LUAD_binary_test/WSSS4LUAD_binary_test_image_embeddings_normalized.npy +3 -0
  36. WSSS4LUAD_binary_test/WSSS4LUAD_binary_test_text_embeddings.npy +3 -0
  37. WSSS4LUAD_binary_test/WSSS4LUAD_binary_test_text_embeddings_normalized.npy +3 -0
  38. WSSS4LUAD_binary_train/WSSS4LUAD_binary_train.csv +0 -0
  39. WSSS4LUAD_binary_train/WSSS4LUAD_binary_train_image_embeddings.npy +3 -0
  40. WSSS4LUAD_binary_train/WSSS4LUAD_binary_train_image_embeddings_normalized.npy +3 -0
  41. WSSS4LUAD_binary_train/WSSS4LUAD_binary_train_text_embeddings.npy +3 -0
  42. WSSS4LUAD_binary_train/WSSS4LUAD_binary_train_text_embeddings_normalized.npy +3 -0
.DS_Store ADDED
Binary file (6.15 kB). View file
 
DigestPath_test/DigestPath_test.csv ADDED
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DigestPath_test/DigestPath_test_image_embeddings.npy ADDED
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DigestPath_test/DigestPath_test_image_embeddings_normalized.npy ADDED
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DigestPath_train/DigestPath_train.csv ADDED
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Kather_test/Kather_test.csv ADDED
The diff for this file is too large to render. See raw diff
 
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Kather_test/try.py ADDED
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+ with open("./Kather_test.csv") as f:
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+ data = f.readlines()
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+
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+ labels = []
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+ full = []
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+ img_base = "/Users/akshay/Downloads/CRC-VAL-HE-7K"
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+
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+ for line in data[1:]:
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+ _, fn, lb, cp = line.strip().split(",")
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+ labels.append(lb)
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+ full.append((cp, " ".join(cp.split()[5:])[:-1]))
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+ print(f"{img_base}/{lb}/{fn}/", lb)
13
+
14
+ labels = set(labels)
15
+ full = set(full)
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+
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+ print(labels)
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+ print(full)
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+
Kather_train/Kather_train.csv ADDED
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