Update README.md
Browse files
README.md
CHANGED
|
@@ -303,7 +303,7 @@ Function predictions are generated using `DeepFRI` across
|
|
| 303 |
Generating train split: 100%|ββββββββββββ| 1332900735/1332900735 [13:11<00:00, 1684288.89 examples/s]
|
| 304 |
Loading dataset shards: 100%|ββββββββββββββββββββββββββββββββββββββ| 219/219 [01:22<00:00, 2.66it/s]
|
| 305 |
|
| 306 |
-
this loads the `>1.3B` function predictions for all 211069 targets
|
| 307 |
The predictions are stored in long format, but can be easily converted to a wide format using pandas:
|
| 308 |
|
| 309 |
>>> import pandas
|
|
@@ -312,7 +312,8 @@ The predictions are stored in long format, but can be easily converted to a wide
|
|
| 312 |
columns = "term_id",
|
| 313 |
index = "id",
|
| 314 |
values = "Y_hat")
|
| 315 |
-
>>> dataset_function_prediction_wide
|
|
|
|
| 316 |
|
| 317 |
## Dataset Details
|
| 318 |
|
|
|
|
| 303 |
Generating train split: 100%|ββββββββββββ| 1332900735/1332900735 [13:11<00:00, 1684288.89 examples/s]
|
| 304 |
Loading dataset shards: 100%|ββββββββββββββββββββββββββββββββββββββ| 219/219 [01:22<00:00, 2.66it/s]
|
| 305 |
|
| 306 |
+
this loads the `>1.3B` function predictions for all `211069` targets across `6315` GO and EC ontology terms.
|
| 307 |
The predictions are stored in long format, but can be easily converted to a wide format using pandas:
|
| 308 |
|
| 309 |
>>> import pandas
|
|
|
|
| 312 |
columns = "term_id",
|
| 313 |
index = "id",
|
| 314 |
values = "Y_hat")
|
| 315 |
+
>>> dataset_function_prediction_wide.shape
|
| 316 |
+
(211069, 6315)
|
| 317 |
|
| 318 |
## Dataset Details
|
| 319 |
|