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"""
Copyright 2024 RobotsMali AI4D Lab.
Licensed under the Creative Commons Attribution 4.0 International License (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
https://creativecommons.org/licenses/by/4.0/
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
"""
import csv
import re
import os
import sys
import glob
def clean_tsv(input_file : str, output_file: str, revision_file: str) -> None:
"""Generic function
Args:
input_file (str): The path to the tsv file to clean
output_file (str): The path to the file to save the cleaned rows in. (Typically the same file)
revision_file (str): The path to the file to save still inconsistent rows in
Returns:
_type_: _description_
"""
cleaned_rows = []
revision_rows = []
# Helper function to clean the line
def clean_line(line):
# Remove unwanted characters
line = re.sub(r'[<>"]', '', line)
# Replace consecutive tabs with a single tab
line = re.sub(r'\t+', '\t', line)
return line
# Open the input file and process each row
with open(input_file, 'r', encoding='utf-8') as infile:
reader = csv.reader(infile, delimiter='\t')
for row in reader:
# Clean the row
row = [clean_line(item) for item in row]
# If the row has exactly 4 items, ensure the first two are numbers
if len(row) == 4:
try:
# Ensure the first two items are numbers
# Those values aren't intended for use, simple format check by Exception Catching.
start_time = int(row[0])
end_time = int(row[1])
# Append the cleaned row
cleaned_rows.append(row)
except ValueError:
# If timestamps are not valid integers, move to revision
revision_rows.append(row)
print("One problematic row has been added to revision")
# If the row has more than 4 items and no consecutive \t, check for \t swapped with space
elif len(row) > 4:
row_str = "\t".join(row)
if ',' in row_str:
row_str = re.sub(r',\t', ', ', row_str)
# After fixing spaces, split again and check the length
row_fixed = row_str.split('\t')
if len(row_fixed) == 4:
cleaned_rows.append(row_fixed)
else:
revision_rows.append(row_fixed)
print("One problematic row has been added to revision")
else:
# For rows with incorrect number of elements, move to revision
revision_rows.append(row)
print("One problematic row has been added to revision")
# Write the cleaned rows to the output file
with open(output_file, 'w', encoding='utf-8', newline='') as outfile:
writer = csv.writer(outfile, delimiter='\t')
writer.writerows(cleaned_rows)
print(f"**** New cleaned tsv file saved at {output_file} ****")
if revision_rows:
# Write the revision rows to the revision file if there are rows to review
with open(revision_file, 'w', encoding='utf-8', newline='') as revfile:
writer = csv.writer(revfile, delimiter='\t')
writer.writerows(revision_rows)
print(f"**** New revision file saved at {revision_file} ****")
if __name__ == "__main__":
transcription_dir = sys.argv[1]
# Ensure revision directory exist
rev_dir = f'{transcription_dir}/revisions'
os.makedirs(rev_dir, exist_ok=True)
# get the paths to all the tsv files
tsv_files = glob.glob(transcription_dir + "/*.tsv")
for tsv_file in tsv_files:
in_file = tsv_file
out_file = in_file
rev_file = rev_dir + "/" + tsv_file.split("/")[-1][:-4] + "-rev.tsv"
clean_tsv(input_file=in_file, output_file=out_file, revision_file=rev_file)
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