Missing required dependencies ['numpy'] for anaconda ver5.3.1 on pycharm
Your pycharm created a new environment for your project I suspect. Maybe it copied across the anaconda python.exe but not all the global packages.
In pycharm you can go to the project properties where you can see a list of all the packages available, and add additional packages. Here you can install Numpy.
File --> Settings --> Project:  --> Project Interpreter
I just installed anaconda ver5.3.1 which uses python 3.7.
I encountered the following error;

"Missing required dependencies {0}".format(missing_dependencies))
   ImportError: Missing required dependencies ['numpy']

I have upgraded numpy, pandas to the latest version using conda but the same error appears. To fix this problem, I have to downgrade to an older anaconda version which uses python 3.6
I am using Windows 10.
EDIT: I just discovered this problem is more related to pycharm than anaconda. I got this error while running pycharm in debug mode. However, when I run the same python script in Anaconda prompt console, there is no error. 
What are some possible pycharm settings I should check to fix this problem? Are there ways to configure pycharm to output more verbose error messages?