text: /*
   * bampair.cpp for MSIsensor 
   * Copyright (c) 2013 Beifang Niu && Kai Ye WUGSC All Rights Reserved.
   *
   * Permission is hereby granted, free of charge, to any person
   * obtaining a copy of this software and associated documentation
   * files (the "Software"), to deal in the Software without
   * restriction, including without limitation the rights to use,
   * copy, modify, merge, publish, distribute, sublicense, and/or sell
   * copies of the Software, and to permit persons to whom the
   * Software is furnished to do so, subject to the following
   * conditions:
   *
   * The above copyright notice and this permission notice shall be
   * included in all copies or substantial portions of the Software.
   *
   * THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
   * EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES
   * OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
   * NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT
   * HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY,
   * WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING
   * FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR
   * OTHER DEALINGS IN THE SOFTWARE.
   */
  
  #include <iostream>
  #include <sstream>
  #include <bitset>
  #include <omp.h>
  
  #include "Bamtumors.h"
  
  extern Param paramd;
  
  BamTumors::BamTumors() 
      : _start(0)
      , _end(0)
      , _chr("")
      , _startSite(NULL)
      , _endSite(NULL)
  {
      //xxxx
  
  };
  
  BamTumors::~BamTumors()
  {
      //xxx
  };
  
  