text: /* affy10KDetails.c was originally generated by the autoSql program, which also 
   * generated affy10KDetails.h and affy10KDetails.sql.  This module links the database and
   * the RAM representation of objects. */
  
  /* Copyright (C) 2014 The Regents of the University of California 
   * See README in this or parent directory for licensing information. */
  
  #include "common.h"
  #include "linefile.h"
  #include "dystring.h"
  #include "jksql.h"
  #include "affy10KDetails.h"
  
  
  void affy10KDetailsStaticLoad(char **row, struct affy10KDetails *ret)
  /* Load a row from affy10KDetails table into ret.  The contents of ret will
   * be replaced at the next call to this function. */
  {
  ret->affyId = row[0];
  ret->rsId = row[1];
  ret->tscId = row[2];
  strcpy(ret->baseA, row[3]);
  strcpy(ret->baseB, row[4]);
  strcpy(ret->sequenceA, row[5]);
  strcpy(ret->sequenceB, row[6]);
  strcpy(ret->enzyme, row[7]);
  }
  
  struct affy10KDetails *affy10KDetailsLoad(char **row)
  /* Load a affy10KDetails from row fetched with select * from affy10KDetails
   * from database.  Dispose of this with affy10KDetailsFree(). */
  {
  struct affy10KDetails *ret;
  
  AllocVar(ret);
  ret->affyId = cloneString(row[0]);
  ret->rsId = cloneString(row[1]);
  ret->tscId = cloneString(row[2]);
  strcpy(ret->baseA, row[3]);
  strcpy(ret->baseB, row[4]);
  strcpy(ret->sequenceA, row[5]);
  strcpy(ret->sequenceB, row[6]);
  strcpy(ret->enzyme, row[7]);
  return ret;
  }
  
  struct affy10KDetails *affy10KDetailsLoadAll(char *fileName) 
  /* Load all affy10KDetails from a whitespace-separated file.
   * Dispose of this with affy10KDetailsFreeList(). */
  {
  struct affy10KDetails *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[8];
  
  while (lineFileRow(lf, row))
      {
      el = affy10KDetailsLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct affy10KDetails *affy10KDetailsLoadAllByChar(char *fileName, char chopper) 
  /* Load all affy10KDetails from a chopper separated file.
   * Dispose of this with affy10KDetailsFreeList(). */
  {
  struct affy10KDetails *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[8];
  
  while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
      {
      el = affy10KDetailsLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct affy10KDetails *affy10KDetailsLoadByQuery(struct sqlConnection *conn, char *query)
  /* Load all affy10KDetails from table that satisfy the query given.  
   * Where query is of the form 'select * from example where something=something'
   * or 'select example.* from example, anotherTable where example.something = 
   * anotherTable.something'.
   * Dispose of this with affy10KDetailsFreeList(). */
  {
  struct affy10KDetails *list = NULL, *el;
  struct sqlResult *sr;
  char **row;
  
  sr = sqlGetResult(conn, query);
  while ((row = sqlNextRow(sr)) != NULL)
      {
      el = affy10KDetailsLoad(row);
      slAddHead(&list, el);
      }
  slReverse(&list);
  sqlFreeResult(&sr);
  return list;
  }
  
  void affy10KDetailsSaveToDb(struct sqlConnection *conn, struct affy10KDetails *el, char *tableName, int updateSize)
  /* Save affy10KDetails as a row to the table specified by tableName. 
   * As blob fields may be arbitrary size updateSize specifies the approx size
   * of a string that would contain the entire query. Arrays of native types are
   * converted to comma separated strings and loaded as such, User defined types are
   * inserted as NULL. Strings are automatically escaped to allow insertion into the database. */
  {
  struct dyString *update = newDyString(updateSize);
  sqlDyStringPrintf(update, "insert into %s values ( '%s','%s','%s','%s','%s','%s','%s','%s')", 
  	tableName,  el->affyId,  el->rsId,  el->tscId,  el->baseA,  el->baseB,  el->sequenceA,  el->sequenceB,  el->enzyme);
  sqlUpdate(conn, update->string);
  freeDyString(&update);
  }
  
  struct affy10KDetails *affy10KDetailsCommaIn(char **pS, struct affy10KDetails *ret)
  /* Create a affy10KDetails out of a comma separated string. 
   * This will fill in ret if non-null, otherwise will
   * return a new affy10KDetails */
  {
  char *s = *pS;
  
  if (ret == NULL)
      AllocVar(ret);
  ret->affyId = sqlStringComma(&s);
  ret->rsId = sqlStringComma(&s);
  ret->tscId = sqlStringComma(&s);
  sqlFixedStringComma(&s, ret->baseA, sizeof(ret->baseA));
  sqlFixedStringComma(&s, ret->baseB, sizeof(ret->baseB));
  sqlFixedStringComma(&s, ret->sequenceA, sizeof(ret->sequenceA));
  sqlFixedStringComma(&s, ret->sequenceB, sizeof(ret->sequenceB));
  sqlFixedStringComma(&s, ret->enzyme, sizeof(ret->enzyme));
  *pS = s;
  return ret;
  }
  
  void affy10KDetailsFree(struct affy10KDetails **pEl)
  /* Free a single dynamically allocated affy10KDetails such as created
   * with affy10KDetailsLoad(). */
  {
  struct affy10KDetails *el;
  
  if ((el = *pEl) == NULL) return;
  freeMem(el->affyId);
  freeMem(el->rsId);
  freeMem(el->tscId);
  freez(pEl);
  }
  
  void affy10KDetailsFreeList(struct affy10KDetails **pList)
  /* Free a list of dynamically allocated affy10KDetails's */
  {
  struct affy10KDetails *el, *next;
  
  for (el = *pList; el != NULL; el = next)
      {
      next = el->next;
      affy10KDetailsFree(&el);
      }
  *pList = NULL;
  }
  
  void affy10KDetailsOutput(struct affy10KDetails *el, FILE *f, char sep, char lastSep) 
  /* Print out affy10KDetails.  Separate fields with sep. Follow last field with lastSep. */
  {
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->affyId);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->rsId);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->tscId);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->baseA);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->baseB);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->sequenceA);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->sequenceB);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->enzyme);
  if (sep == ',') fputc('"',f);
  fputc(lastSep,f);
  }
  
  /* -------------------------------- End autoSql Generated Code -------------------------------- */
  
  