text: /* encodeErgeTransTransf.c was originally generated by the autoSql program, which also 
   * generated encodeErgeTransTransf.h and encodeErgeTransTransf.sql.  This module links the database and
   * the RAM representation of objects. */
  
  #include "common.h"
  #include "linefile.h"
  #include "dystring.h"
  #include "jksql.h"
  #include "encode/encodeErgeTransTransf.h"
  
  
  struct encodeErgeTransTransf *encodeErgeTransTransfLoad(char **row)
  /* Load a encodeErgeTransTransf from row fetched with select * from encodeErgeTransTransf
   * from database.  Dispose of this with encodeErgeTransTransfFree(). */
  {
  struct encodeErgeTransTransf *ret;
  int sizeOne,i;
  char *s;
  
  AllocVar(ret);
  ret->blockCount = sqlUnsigned(row[9]);
  ret->chrom = cloneString(row[0]);
  ret->chromStart = sqlUnsigned(row[1]);
  ret->chromEnd = sqlUnsigned(row[2]);
  ret->name = cloneString(row[3]);
  ret->score = sqlUnsigned(row[4]);
  strcpy(ret->strand, row[5]);
  ret->thickStart = sqlUnsigned(row[6]);
  ret->thickEnd = sqlUnsigned(row[7]);
  ret->reserved = sqlUnsigned(row[8]);
  sqlUnsignedDynamicArray(row[10], &ret->blockSizes, &sizeOne);
  assert(sizeOne == ret->blockCount);
  sqlUnsignedDynamicArray(row[11], &ret->chromStarts, &sizeOne);
  assert(sizeOne == ret->blockCount);
  ret->Id = cloneString(row[12]);
  ret->color = cloneString(row[13]);
  return ret;
  }
  
  struct encodeErgeTransTransf *encodeErgeTransTransfLoadAll(char *fileName) 
  /* Load all encodeErgeTransTransf from a whitespace-separated file.
   * Dispose of this with encodeErgeTransTransfFreeList(). */
  {
  struct encodeErgeTransTransf *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[14];
  
  while (lineFileRow(lf, row))
      {
      el = encodeErgeTransTransfLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct encodeErgeTransTransf *encodeErgeTransTransfLoadAllByChar(char *fileName, char chopper) 
  /* Load all encodeErgeTransTransf from a chopper separated file.
   * Dispose of this with encodeErgeTransTransfFreeList(). */
  {
  struct encodeErgeTransTransf *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[14];
  
  while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
      {
      el = encodeErgeTransTransfLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct encodeErgeTransTransf *encodeErgeTransTransfCommaIn(char **pS, struct encodeErgeTransTransf *ret)
  /* Create a encodeErgeTransTransf out of a comma separated string. 
   * This will fill in ret if non-null, otherwise will
   * return a new encodeErgeTransTransf */
  {
  char *s = *pS;
  int i;
  
  if (ret == NULL)
      AllocVar(ret);
  ret->chrom = sqlStringComma(&s);
  ret->chromStart = sqlUnsignedComma(&s);
  ret->chromEnd = sqlUnsignedComma(&s);
  ret->name = sqlStringComma(&s);
  ret->score = sqlUnsignedComma(&s);
  sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand));
  ret->thickStart = sqlUnsignedComma(&s);
  ret->thickEnd = sqlUnsignedComma(&s);
  ret->reserved = sqlUnsignedComma(&s);
  ret->blockCount = sqlUnsignedComma(&s);
  s = sqlEatChar(s, '{');
  AllocArray(ret->blockSizes, ret->blockCount);
  for (i=0; i<ret->blockCount; ++i)
      {
      ret->blockSizes[i] = sqlUnsignedComma(&s);
      }
  s = sqlEatChar(s, '}');
  s = sqlEatChar(s, ',');
  s = sqlEatChar(s, '{');
  AllocArray(ret->chromStarts, ret->blockCount);
  for (i=0; i<ret->blockCount; ++i)
      {
      ret->chromStarts[i] = sqlUnsignedComma(&s);
      }
  s = sqlEatChar(s, '}');
  s = sqlEatChar(s, ',');
  ret->Id = sqlStringComma(&s);
  ret->color = sqlStringComma(&s);
  *pS = s;
  return ret;
  }
  
  void encodeErgeTransTransfFree(struct encodeErgeTransTransf **pEl)
  /* Free a single dynamically allocated encodeErgeTransTransf such as created
   * with encodeErgeTransTransfLoad(). */
  {
  struct encodeErgeTransTransf *el;
  
  if ((el = *pEl) == NULL) return;
  freeMem(el->chrom);
  freeMem(el->name);
  freeMem(el->blockSizes);
  freeMem(el->chromStarts);
  freeMem(el->Id);
  freeMem(el->color);
  freez(pEl);
  }
  
  void encodeErgeTransTransfFreeList(struct encodeErgeTransTransf **pList)
  /* Free a list of dynamically allocated encodeErgeTransTransf's */
  {
  struct encodeErgeTransTransf *el, *next;
  
  for (el = *pList; el != NULL; el = next)
      {
      next = el->next;
      encodeErgeTransTransfFree(&el);
      }
  *pList = NULL;
  }
  
  void encodeErgeTransTransfOutput(struct encodeErgeTransTransf *el, FILE *f, char sep, char lastSep) 
  /* Print out encodeErgeTransTransf.  Separate fields with sep. Follow last field with lastSep. */
  {
  int i;
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->chrom);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  fprintf(f, "%u", el->chromStart);
  fputc(sep,f);
  fprintf(f, "%u", el->chromEnd);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->name);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  fprintf(f, "%u", el->score);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->strand);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  fprintf(f, "%u", el->thickStart);
  fputc(sep,f);
  fprintf(f, "%u", el->thickEnd);
  fputc(sep,f);
  fprintf(f, "%u", el->reserved);
  fputc(sep,f);
  fprintf(f, "%u", el->blockCount);
  fputc(sep,f);
  if (sep == ',') fputc('{',f);
  for (i=0; i<el->blockCount; ++i)
      {
      fprintf(f, "%u", el->blockSizes[i]);
      fputc(',', f);
      }
  if (sep == ',') fputc('}',f);
  fputc(sep,f);
  if (sep == ',') fputc('{',f);
  for (i=0; i<el->blockCount; ++i)
      {
      fprintf(f, "%u", el->chromStarts[i]);
      fputc(',', f);
      }
  if (sep == ',') fputc('}',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->Id);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->color);
  if (sep == ',') fputc('"',f);
  fputc(lastSep,f);
  }
  
  /* -------------------------------- End autoSql Generated Code -------------------------------- */
  
  