text: import sys
  import argparse
  import tempfile
  from lib.aggregate_all_epitopes import *
  
  def define_parser():
      parser = argparse.ArgumentParser(
          "pvacbind generate_aggregated_report",
          description="Generate an aggregated report from a pVACbind .all_epitopes.tsv report file.",
          formatter_class=argparse.ArgumentDefaultsHelpFormatter
      )
  
      parser.add_argument(
          "input_file",
          help="A pVACbind .all_epitopes.tsv report file"
      )
      parser.add_argument(
          "output_file",
          help="The file path to write the aggregated report tsv to"
      )
  
      return parser
  
  def main(args_input = sys.argv[1:]):
      parser = define_parser()
      args = parser.parse_args(args_input)
  
      tmp_fh = tempfile.NamedTemporaryFile()
  
      print("Creating Aggreggated Report")
      UnmatchedSequenceAggregateAllEpitopes(args.input_file, args.output_file).execute()
      print("Completed")
  
  if __name__ == '__main__':
      main()
  