text: /****************************************************************************
   * Copyright (C) from 2009 to Present EPAM Systems.
   *
   * This file is part of Indigo toolkit.
   *
   * Licensed under the Apache License, Version 2.0 (the "License");
   * you may not use this file except in compliance with the License.
   * You may obtain a copy of the License at
   *
   * http://www.apache.org/licenses/LICENSE-2.0
   *
   * Unless required by applicable law or agreed to in writing, software
   * distributed under the License is distributed on an "AS IS" BASIS,
   * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
   * See the License for the specific language governing permissions and
   * limitations under the License.
   ***************************************************************************/
  
  #ifndef __indigo_scaffold__
  #define __indigo_scaffold__
  
  #include "indigo_internal.h"
  #include "molecule/query_molecule.h"
  
  class IndigoScaffold : public IndigoObject
  {
  public:
      IndigoScaffold();
      virtual ~IndigoScaffold();
  
      void extractScaffold();
  
      virtual QueryMolecule& getQueryMolecule();
      virtual BaseMolecule& getBaseMolecule();
  
      QueryMolecule max_scaffold;
      ObjArray<QueryMolecule> all_scaffolds;
  };
  
  #endif