text: # pslWScore.sql was originally generated by the autoSql program, which also 
  # generated pslWScore.c and pslWScore.h.  This creates the database representation of
  # an object which can be loaded and saved from RAM in a fairly 
  # automatic way.
  
  #Summary info about a patSpace alignment with a score addition
  CREATE TABLE pslWScore (
      matches int unsigned not null,	# Number of bases that match that arent repeats
      misMatch int unsigned not null,	# Number of bases that dont match
      repMatch int unsigned not null,	# Number of bases that match but are part of repeats
      nCount int unsigned not null,	# Number of N bases
      qNumInsert int unsigned not null,	# Number of inserts in query
      qBaseInsert int not null,	# Number of bases inserted in query
      tNumInsert int unsigned not null,	# Number of inserts in target
      tBaseInsert int not null,	# Number of bases inserted in target
      strand char(2) not null,	# + or - for query strand. For mouse second +- for genomic strand
      qName varchar(255) not null,	# Query sequence name
      qSize int unsigned not null,	# Query sequence size
      qStart int unsigned not null,	# Alignment start position in query
      qEnd int unsigned not null,	# Alignment end position in query
      tName varchar(255) not null,	# Target sequence name
      tSize int unsigned not null,	# Target sequence size
      tStart int unsigned not null,	# Alignment start position in target
      tEnd int unsigned not null,	# Alignment end position in target
      blockCount int unsigned not null,	# Number of blocks in alignment
      blockSizes longblob not null,	# Size of each block
      qStarts longblob not null,	# Start of each block in query.
      tStarts longblob not null,	# Start of each block in target.
      score float not null,	# score field
      index(tName(32),tStart,tEnd)
  );
  