text: # Configuration file for the Sphinx documentation builder.
  #
  # This file only contains a selection of the most common options. For a full
  # list see the documentation:
  # https://www.sphinx-doc.org/en/master/usage/configuration.html
  
  # -- Path setup --------------------------------------------------------------
  
  # If extensions (or modules to document with autodoc) are in another directory,
  # add these directories to sys.path here. If the directory is relative to the
  # documentation root, use os.path.abspath to make it absolute, like shown here.
  #
  # import os
  # import sys
  # sys.path.insert(0, os.path.abspath('.'))
  
  
  import os
  import sys
  import sphinx_bootstrap_theme
  sys.path.insert(0, os.path.abspath('..'))
  
  # -- Project information -----------------------------------------------------
  
  project = '2021 Phytoplankton Physiology Seminar'
  copyright = '2021, Arianna Krinos & Dr. Mick Follows'
  author = 'Arianna Krinos & Dr. Mick Follows'
  
  
  # -- General configuration ---------------------------------------------------
  
  # Add any Sphinx extension module names here, as strings. They can be
  # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom
  # ones.
  extensions = ["myst_parser","sphinx_rtd_theme","sphinx_bootstrap_theme"]
  
  # Add any paths that contain templates here, relative to this directory.
  templates_path = ['_templates']
  
  # List of patterns, relative to source directory, that match files and
  # directories to ignore when looking for source files.
  # This pattern also affects html_static_path and html_extra_path.
  exclude_patterns = ['_build', 'Thumbs.db', '.DS_Store']
  
  
  # -- Options for HTML output -------------------------------------------------
  
  # The theme to use for HTML and HTML Help pages.  See the documentation for
  # a list of builtin themes.
  html_theme = 'bootstrap'
  html_theme_path = sphinx_bootstrap_theme.get_html_theme_path()
  html_theme_options = {
      # Navigation bar title. (Default: ``project`` value)
      'navbar_title': "Physiology Seminar",
  
      # Tab name for entire site. (Default: "Site")
      'navbar_site_name': "Explore Content",
  
      # A list of tuples containing pages or urls to link to.
      # Valid tuples should be in the following forms:
      #    (name, page)                 # a link to a page
      #    (name, "/aa/bb", 1)          # a link to an arbitrary relative url
      #    (name, "http://example.com", True) # arbitrary absolute url
      # Note the "1" or "True" value above as the third argument to indicate
      # an arbitrary url.
      #'navbar_links': [
      #    ("Poseidon", "https://whoi-it.whoi.edu/managing-and-monitoring-jobs-on-poseidon",True),
      #],
  
      # Render the next and previous page links in navbar. (Default: true)
      'navbar_sidebarrel': True,
  
      # Render the current pages TOC in the navbar. (Default: true)
      'navbar_pagenav': False,
  
      # Tab name for the current pages TOC. (Default: "Page")
      'navbar_pagenav_name': "Current",
  
      # Global TOC depth for "site" navbar tab. (Default: 1)
      # Switching to -1 shows all levels.
      'globaltoc_depth': 2,
  
      # Include hidden TOCs in Site navbar?
      #
      # Note: If this is "false", you cannot have mixed ``:hidden:`` and
      # non-hidden ``toctree`` directives in the same page, or else the build
      # will break.
      #
      # Values: "true" (default) or "false"
      'globaltoc_includehidden': "true",
  
      # Fix navigation bar to top of page?
      # Values: "true" (default) or "false"
      'navbar_fixed_top': "true",
  
      # Location of link to source.
      # Options are "nav" (default), "footer" or anything else to exclude.
      'source_link_position': "footer",
  
      # Bootswatch (http://bootswatch.com/) theme.
      #
      # Options are nothing (default) or the name of a valid theme
      # such as "cosmo" or "sandstone".
      #
      # The set of valid themes depend on the version of Bootstrap
      # that's used (the next config option).
      #
      # Currently, the supported themes are:
      # - Bootstrap 2: https://bootswatch.com/2
      # - Bootstrap 3: https://bootswatch.com/3
      'bootswatch_theme': "cerulean",
  
      # Choose Bootstrap version.
      # Values: "3" (default) or "2" (in quotes)
      'bootstrap_version': "3",
  }
  
  # Add any paths that contain custom static files (such as style sheets) here,
  # relative to this directory. They are copied after the builtin static files,
  # so a file named "default.css" will overwrite the builtin "default.css".
  html_static_path = ['_static','_literature']
  