text: var searchData=
  [
    ['s',['s',['../namespaceorbital.html#adf4f6207f3f86d3ab2c32d1c7774af54ab36860d7995537f6496ca1342e36b1a5',1,'orbital']]],
    ['s_5fmatrix',['s_matrix',['../classlcao__wavefunction.html#abe40fc832c14519f7d66e3bf4709af69',1,'lcao_wavefunction::s_matrix()'],['../classlcao__wavefunction_1_1sto3g.html#acd22512a6e77ab2028e1047f59f08a62',1,'lcao_wavefunction::sto3g::s_matrix()']]],
    ['s_5fto_5fau',['s_to_au',['../namespacetools.html#a1fecc68e1c71bf90438f7b43fb5b585a',1,'tools']]],
    ['s_5funit',['S_UNIT',['../globals_8hpp.html#af3f720dc6072de9adbbcabbcb12c501d',1,'globals.hpp']]],
    ['save',['save',['../classarray_3_01data__type_00_011_01_4.html#a93a1e359861b651f222a969a72209bff',1,'array&lt; data_type, 1 &gt;::save()'],['../array____save_8cpp.html#aae2c382151ef7c9aa913361172b30db6',1,'save():&#160;array__save.cpp'],['../array____save_8cpp.html#a41c4b9d425f799f9ad8ca76de58d37dc',1,'save(std::string &amp;filename):&#160;array__save.cpp'],['../save_8cpp.html#a656917d5be44507a5543c8fa5c63d0e1',1,'save(const std::string &amp;dir, const std::string &amp;comment=&quot;&quot;):&#160;save.cpp']]],
    ['save_2ecpp',['save.cpp',['../save_8cpp.html',1,'']]],
    ['save_5ftiming',['save_timing',['../classtimer.html#ae0d2ffab886b6422a34817af226b33e2',1,'timer']]],
    ['save_5ftranspose_5fto',['save_transpose_to',['../array____save__transpose__to_8cpp.html#a1360d0608833c5e434a211a64ff26cf8',1,'array__save_transpose_to.cpp']]],
    ['scan_5fconfig_5ffile',['scan_config_file',['../classsettings.html#af77c0aee3c6228ec78422f2b7b315445',1,'settings::scan_config_file(const std::string &amp;option, const int &amp;default_key)'],['../classsettings.html#aef9029b951f6da641c4d73a636c63031',1,'settings::scan_config_file(const std::string &amp;option, const double &amp;default_key)'],['../classsettings.html#a1bd6a9a1f6ec90ae977315298c212af3',1,'settings::scan_config_file(const std::string &amp;option, const std::string &amp;default_key)'],['../classsettings.html#a540855a18471993320e6aa62baae9c00',1,'settings::scan_config_file(const std::string &amp;option, const bool &amp;default_key)']]],
    ['scf',['scf',['../classalgorithm_1_1scf.html',1,'algorithm']]],
    ['scf',['scf',['../classalgorithm_1_1scf.html#a36854e8fdc6b6f93daa6c763988ccb3c',1,'algorithm::scf::scf()'],['../classalgorithm_1_1scf.html#a52e2de04d64a911d016d278d89bd1c72',1,'algorithm::scf::scf(array &amp;h_matrix, array &amp;s_matrix, array &amp;v_matrix)']]],
    ['scf_2ehpp',['scf.hpp',['../scf_8hpp.html',1,'']]],
    ['scf_5f_5fbuild_5fdensity_5fmatrix_2ecpp',['scf__build_density_matrix.cpp',['../scf____build__density__matrix_8cpp.html',1,'']]],
    ['scf_5f_5fcheck_5fconvergence_2ecpp',['scf__check_convergence.cpp',['../scf____check__convergence_8cpp.html',1,'']]],
    ['scf_5f_5fcheck_5flowest_5forbital_2ecpp',['scf__check_lowest_orbital.cpp',['../scf____check__lowest__orbital_8cpp.html',1,'']]],
    ['scf_5f_5fcheck_5fmo_5ftype_2ecpp',['scf__check_mo_type.cpp',['../scf____check__mo__type_8cpp.html',1,'']]],
    ['scf_5f_5fconstructor_2ecpp',['scf__constructor.cpp',['../scf____constructor_8cpp.html',1,'']]],
    ['scf_5f_5fconverged_2ecpp',['scf__converged.cpp',['../scf____converged_8cpp.html',1,'']]],
    ['scf_5f_5fdensity_5fmatrix_2ecpp',['scf__density_matrix.cpp',['../scf____density__matrix_8cpp.html',1,'']]],
    ['scf_5f_5fenergy_2ecpp',['scf__energy.cpp',['../scf____energy_8cpp.html',1,'']]],
    ['scf_5f_5ffock_5fmatrix_2ecpp',['scf__fock_matrix.cpp',['../scf____fock__matrix_8cpp.html',1,'']]],
    ['scf_5f_5fget_5fdensity_5fmatrix_2ecpp',['scf__get_density_matrix.cpp',['../scf____get__density__matrix_8cpp.html',1,'']]],
    ['scf_5f_5fget_5fenergy_2ecpp',['scf__get_energy.cpp',['../scf____get__energy_8cpp.html',1,'']]],
    ['scf_5f_5fget_5ffock_5fmatrix_2ecpp',['scf__get_fock_matrix.cpp',['../scf____get__fock__matrix_8cpp.html',1,'']]],
    ['scf_5f_5fget_5fwavefunction_2ecpp',['scf__get_wavefunction.cpp',['../scf____get__wavefunction_8cpp.html',1,'']]],
    ['scf_5f_5fhighest_5fmo_2ecpp',['scf__highest_mo.cpp',['../scf____highest__mo_8cpp.html',1,'']]],
    ['scf_5f_5finit_2ecpp',['scf__init.cpp',['../scf____init_8cpp.html',1,'']]],
    ['scf_5f_5finit_5fscf_2ecpp',['scf__init_scf.cpp',['../scf____init__scf_8cpp.html',1,'']]],
    ['scf_5f_5fiterations_5fready_2ecpp',['scf__iterations_ready.cpp',['../scf____iterations__ready_8cpp.html',1,'']]],
    ['scf_5f_5flowest_5fmo_2ecpp',['scf__lowest_mo.cpp',['../scf____lowest__mo_8cpp.html',1,'']]],
    ['scf_5f_5fnumber_5fof_5fiterations_2ecpp',['scf__number_of_iterations.cpp',['../scf____number__of__iterations_8cpp.html',1,'']]],
    ['scf_5f_5freport_5fscf_5fiterations_2ecpp',['scf__report_scf_iterations.cpp',['../scf____report__scf__iterations_8cpp.html',1,'']]],
    ['scf_5f_5froothaan_5fequation_5fsolver_2ecpp',['scf__roothaan_equation_solver.cpp',['../scf____roothaan__equation__solver_8cpp.html',1,'']]],
    ['scf_5f_5fset_5fconfig_2ecpp',['scf__set_config.cpp',['../scf____set__config_8cpp.html',1,'']]],
    ['scf_5f_5fstart_5fiterations_2ecpp',['scf__start_iterations.cpp',['../scf____start__iterations_8cpp.html',1,'']]],
    ['scf_5f_5fupdate_5ffock_5fmatrix_2ecpp',['scf__update_fock_matrix.cpp',['../scf____update__fock__matrix_8cpp.html',1,'']]],
    ['scf_5fconverged',['scf_converged',['../classalgorithm_1_1scf.html#ae0c121c44799933ba106c39b66d59b25',1,'algorithm::scf']]],
    ['scf_5fconvergence_5fcriteria',['scf_convergence_criteria',['../settings____scf__convergence__criteria_8cpp.html#af31096aa682a8c6e542b5cf7a0c4a9f9',1,'settings__scf_convergence_criteria.cpp']]],
    ['scf_5fcriteria',['scf_criteria',['../classsettings.html#aceb16c8d65bc22253d8f34323d63fa2c',1,'settings']]],
    ['scf_5fenergy',['scf_energy',['../classalgorithm_1_1scf.html#a888a787512508bb7c3d2f0879b3a6758',1,'algorithm::scf']]],
    ['scf_5fiterations_5fready',['scf_iterations_ready',['../classalgorithm_1_1scf.html#ad74629449b1540221d304a9f9ab0b309',1,'algorithm::scf']]],
    ['scf_5fready',['scf_ready',['../lcao__wavefunction____scf__ready_8cpp.html#a057faa0d1f8badf0c81c5b8b280f02e2',1,'lcao_wavefunction__scf_ready.cpp']]],
    ['scratch',['scratch',['../namespaceoption.html#a718f9dc10f6aa27fb9624738cd514c04affa60f96cf13dc4c5c893749c3969f9c',1,'option']]],
    ['scratch_5fdir',['scratch_dir',['../settings____scratch__dir_8cpp.html#abe5bc435b6eee119bf0dbcb457b98601',1,'settings__scratch_dir.cpp']]],
    ['scratch_5fdir_5fmanager',['scratch_dir_manager',['../classsettings.html#a5ac0a451e8ac8572395c017c28ed30e0',1,'settings']]],
    ['second_5fcolumn_5flength',['SECOND_COLUMN_LENGTH',['../log__file__handler____report__input__list_8cpp.html#ab8d4cd13d64fa48c7cd7bb2ce62bf2f1',1,'SECOND_COLUMN_LENGTH():&#160;log_file_handler__report_input_list.cpp'],['../molecular__system____report__input__reading_8cpp.html#ab8d4cd13d64fa48c7cd7bb2ce62bf2f1',1,'SECOND_COLUMN_LENGTH():&#160;molecular_system__report_input_reading.cpp'],['../scf____report__scf__iterations_8cpp.html#ab8d4cd13d64fa48c7cd7bb2ce62bf2f1',1,'SECOND_COLUMN_LENGTH():&#160;scf__report_scf_iterations.cpp']]],
    ['second_5frank',['second_rank',['../classarray_3_01data__type_00_011_01_4.html#ae0c109fff2335f2686e18286d09231a9',1,'array&lt; data_type, 1 &gt;::second_rank() const '],['../classarray_3_01data__type_00_011_01_4.html#a40b27bc7e66655abfc9be406c6a2cbbc',1,'array&lt; data_type, 1 &gt;::second_rank() const '],['../second__rank_8cpp.html#a13fa7dc83b11ccfad767227afb734d93',1,'second_rank():&#160;second_rank.cpp']]],
    ['second_5frank_2ecpp',['second_rank.cpp',['../second__rank_8cpp.html',1,'']]],
    ['set',['set',['../classarray_3_01data__type_00_011_01_4.html#a7540532beb25f06d662bf332d89bd3b4',1,'array&lt; data_type, 1 &gt;::set()'],['../array____set_8cpp.html#a398d7c717dc81baf9b1b405bc24518b4',1,'set(const unsigned int &amp;i, const double &amp;value):&#160;array__set.cpp'],['../array____set_8cpp.html#a043dafb69785f1acea7e77f03029af45',1,'set(const unsigned int &amp;i, const unsigned int &amp;j, const double &amp;value):&#160;array__set.cpp'],['../array____set_8cpp.html#a9701871e3eb2ac06ed53acdb006e88bb',1,'set(const unsigned int &amp;i, const unsigned int &amp;j, const unsigned int &amp;m, const double &amp;value):&#160;array__set.cpp'],['../array____set_8cpp.html#add44f6e241c1f829eafcc8bd51ec4afc',1,'set(const unsigned int &amp;i, const unsigned int &amp;j, const unsigned int &amp;m, const unsigned int &amp;n, const double &amp;value):&#160;array__set.cpp']]],
    ['set_2ecpp',['set.cpp',['../set_8cpp.html',1,'']]],
    ['set_5fall',['set_all',['../classarray_3_01data__type_00_011_01_4.html#aa083802119d026529bf440ba6ee37748',1,'array&lt; data_type, 1 &gt;::set_all(data_type input)'],['../classarray_3_01data__type_00_011_01_4.html#a2c6d42c0e1712f2916ba03eaab87fd32',1,'array&lt; data_type, 1 &gt;::set_all(const data_type &amp;input)'],['../array____set__all_8cpp.html#aa11e53d1fd53ad5286f427feafb7a109',1,'set_all(const double &amp;value):&#160;array__set_all.cpp'],['../set__all_8cpp.html#a53580e8fbf266b8819933fee80c9f6b5',1,'set_all(data_type input):&#160;set_all.cpp']]],
    ['set_5fall_2ecpp',['set_all.cpp',['../set__all_8cpp.html',1,'']]],
    ['set_5fall_5f1d_5felements',['set_all_1d_elements',['../array____set__all__1d__elements_8cpp.html#a1a61ad63de00ea10638a91d8bf1ce45c',1,'array__set_all_1d_elements.cpp']]],
    ['set_5fall_5f2d_5felements',['set_all_2d_elements',['../array____set__all__2d__elements_8cpp.html#a2aa1a2c3c95dd3d4958b35b101ba4f5b',1,'array__set_all_2d_elements.cpp']]],
    ['set_5fall_5f3d_5felements',['set_all_3d_elements',['../array____set__all__3d__elements_8cpp.html#a074e7e4229a3a96d175840f7a4101e08',1,'array__set_all_3d_elements.cpp']]],
    ['set_5fall_5f4d_5felements',['set_all_4d_elements',['../array____set__all__4d__elements_8cpp.html#a833b48dbf807ad05d4f603bcaf83db03',1,'array__set_all_4d_elements.cpp']]],
    ['set_5fconfig',['set_config',['../log__file__handler____set__config_8cpp.html#aad67116c2a463e9d0dd4ba3f39cb9155',1,'set_config(settings &amp;runtime_setup):&#160;log_file_handler__set_config.cpp'],['../scf____set__config_8cpp.html#aad67116c2a463e9d0dd4ba3f39cb9155',1,'set_config(settings &amp;runtime_setup):&#160;scf__set_config.cpp']]],
    ['set_5fconstant',['set_constant',['../array____set__constant_8cpp.html#aa60ee866f79590558ea84d42b002689c',1,'array__set_constant.cpp']]],
    ['set_5fdiagonal',['set_diagonal',['../array____set__diagonal_8cpp.html#ad1c4dbc40a0a5ff31e79553a79a21ef6',1,'array__set_diagonal.cpp']]],
    ['set_5ffixed',['set_fixed',['../log__file__handler____set__fixed_8cpp.html#ad01d26b299787713e09daabc52e3d6bf',1,'log_file_handler__set_fixed.cpp']]],
    ['set_5fiterator',['set_iterator',['../basis__set____set__iterator_8cpp.html#ae16a336d3c96afba35dab4120a3b8c04',1,'basis_set__set_iterator.cpp']]],
    ['set_5fleft',['set_left',['../log__file__handler____set__left_8cpp.html#af54c0729ba617cdf0ff9f59a7b881bae',1,'log_file_handler__set_left.cpp']]],
    ['set_5fname',['set_name',['../array____set__name_8cpp.html#a8da640809bb99317a18dcf70a6f6fa9f',1,'set_name(const std::string &amp;new_name):&#160;array__set_name.cpp'],['../molecular__system____set__name_8cpp.html#ad5260b9627048b854b45d05ed34adc22',1,'set_name(const std::string &amp;name):&#160;molecular_system__set_name.cpp'],['../timer____set__name_8cpp.html#aa96acd11957fdfefffba3c24eea78fe4',1,'set_name(std::string &amp;given_name):&#160;timer__set_name.cpp']]],
    ['set_5fnew_5fline',['set_new_line',['../log__file__handler____set__new__line_8cpp.html#ad0e41617d6fe4dac407d360ab2268aef',1,'log_file_handler__set_new_line.cpp']]],
    ['set_5fright',['set_right',['../log__file__handler____set__right_8cpp.html#a9ff4e79294a778a9b1d5c43704398f60',1,'log_file_handler__set_right.cpp']]],
    ['set_5fscientific_5fnotation',['set_scientific_notation',['../log__file__handler____set__scientific__notation_8cpp.html#a66f83d637944346b8c8fb7647c772aea',1,'set_scientific_notation(const unsigned int &amp;width):&#160;log_file_handler__set_scientific_notation.cpp'],['../log__file__handler____set__scientific__notation_8cpp.html#a155f81bab77035e635f78f5fbdbbb391',1,'set_scientific_notation():&#160;log_file_handler__set_scientific_notation.cpp']]],
    ['set_5fsystem_5fcom',['set_system_com',['../molecular__system____set__system__com_8cpp.html#afdad1f464c569a5d801261685f149c45',1,'molecular_system__set_system_com.cpp']]],
    ['set_5ftask_5fnumber',['set_task_number',['../molecular__system____set__task__number_8cpp.html#a984737dcdb4b7dd1272d8b46b55720c6',1,'molecular_system__set_task_number.cpp']]],
    ['set_5ftimer_5flength',['set_timer_length',['../timer____set__timer__length_8cpp.html#a19f82d7a1017e80eea26cd177301a427',1,'timer__set_timer_length.cpp']]],
    ['set_5fwidth',['set_width',['../log__file__handler____set__width_8cpp.html#aedc57cd2b69a319370d94e2fb8d85bf8',1,'log_file_handler__set_width.cpp']]],
    ['set_5fzero',['set_zero',['../classarray_3_01data__type_00_011_01_4.html#a57668e580961e811d414e0f9fc3c9b9d',1,'array&lt; data_type, 1 &gt;::set_zero()'],['../set__zero_8cpp.html#a3608245acad09c3fff795dd5c4952cbf',1,'set_zero():&#160;set_zero.cpp']]],
    ['set_5fzero_2ecpp',['set_zero.cpp',['../set__zero_8cpp.html',1,'']]],
    ['settings',['settings',['../classsettings.html',1,'settings'],['../classsettings.html#a75dddcdfe65d5b1911a31b7dcd79a6ca',1,'settings::settings()'],['../classsettings.html#a6b27532dc268f7096e21f49626959f13',1,'settings::settings(const std::string &amp;filename)']]],
    ['settings_2ehpp',['settings.hpp',['../settings_8hpp.html',1,'']]],
    ['settings_5f_5fbasic_5fassignment_2ecpp',['settings__basic_assignment.cpp',['../settings____basic__assignment_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5fcurrent_5fcpus_2ecpp',['settings__check_current_cpus.cpp',['../settings____check__current__cpus_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5fcurrent_5fdisk_5fspace_2ecpp',['settings__check_current_disk_space.cpp',['../settings____check__current__disk__space_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5fcurrent_5fhostname_2ecpp',['settings__check_current_hostname.cpp',['../settings____check__current__hostname_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5fcurrent_5ftime_2ecpp',['settings__check_current_time.cpp',['../settings____check__current__time_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5fcurrent_5fusername_2ecpp',['settings__check_current_username.cpp',['../settings____check__current__username_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5ffree_5fmemory_2ecpp',['settings__check_free_memory.cpp',['../settings____check__free__memory_8cpp.html',1,'']]],
    ['settings_5f_5fcheck_5ftotal_5fmemory_2ecpp',['settings__check_total_memory.cpp',['../settings____check__total__memory_8cpp.html',1,'']]],
    ['settings_5f_5fconstructor_2ecpp',['settings__constructor.cpp',['../settings____constructor_8cpp.html',1,'']]],
    ['settings_5f_5fctrl_5fkey_2ecpp',['settings__ctrl_key.cpp',['../settings____ctrl__key_8cpp.html',1,'']]],
    ['settings_5f_5fdebug_5fmode_2ecpp',['settings__debug_mode.cpp',['../settings____debug__mode_8cpp.html',1,'']]],
    ['settings_5f_5fdestructor_2ecpp',['settings__destructor.cpp',['../settings____destructor_8cpp.html',1,'']]],
    ['settings_5f_5finput_5ffilename_2ecpp',['settings__input_filename.cpp',['../settings____input__filename_8cpp.html',1,'']]],
    ['settings_5f_5flog_5ffile_2ecpp',['settings__log_file.cpp',['../settings____log__file_8cpp.html',1,'']]],
    ['settings_5f_5fmy_5fsize_2ecpp',['settings__my_size.cpp',['../settings____my__size_8cpp.html',1,'']]],
    ['settings_5f_5fnumeric_5fprecision_2ecpp',['settings__numeric_precision.cpp',['../settings____numeric__precision_8cpp.html',1,'']]],
    ['settings_5f_5foutput_5fmode_2ecpp',['settings__output_mode.cpp',['../settings____output__mode_8cpp.html',1,'']]],
    ['settings_5f_5fread_5finputs_2ecpp',['settings__read_inputs.cpp',['../settings____read__inputs_8cpp.html',1,'']]],
    ['settings_5f_5fread_5flevels_2ecpp',['settings__read_levels.cpp',['../settings____read__levels_8cpp.html',1,'']]],
    ['settings_5f_5fread_5fvalue_5fof_2ecpp',['settings__read_value_of.cpp',['../settings____read__value__of_8cpp.html',1,'']]],
    ['settings_5f_5fremove_5foption_2ecpp',['settings__remove_option.cpp',['../settings____remove__option_8cpp.html',1,'']]],
    ['settings_5f_5frotation_5fmode_2ecpp',['settings__rotation_mode.cpp',['../settings____rotation__mode_8cpp.html',1,'']]],
    ['settings_5f_5fscan_5fconfig_5ffile_2ecpp',['settings__scan_config_file.cpp',['../settings____scan__config__file_8cpp.html',1,'']]],
    ['settings_5f_5fscf_5fconvergence_5fcriteria_2ecpp',['settings__scf_convergence_criteria.cpp',['../settings____scf__convergence__criteria_8cpp.html',1,'']]],
    ['settings_5f_5fscratch_5fdir_2ecpp',['settings__scratch_dir.cpp',['../settings____scratch__dir_8cpp.html',1,'']]],
    ['settings_5f_5ftask_5flevel_2ecpp',['settings__task_level.cpp',['../settings____task__level_8cpp.html',1,'']]],
    ['settings_5f_5ftasks_2ecpp',['settings__tasks.cpp',['../settings____tasks_8cpp.html',1,'']]],
    ['settings_5f_5ftheory_5fdatabase_2ecpp',['settings__theory_database.cpp',['../settings____theory__database_8cpp.html',1,'']]],
    ['settings_5f_5ftranslation_5fmode_2ecpp',['settings__translation_mode.cpp',['../settings____translation__mode_8cpp.html',1,'']]],
    ['settings_5f_5fvibration_5fmode_2ecpp',['settings__vibration_mode.cpp',['../settings____vibration__mode_8cpp.html',1,'']]],
    ['settings_5f_5fwavefunction_5ftype_2ecpp',['settings__wavefunction_type.cpp',['../settings____wavefunction__type_8cpp.html',1,'']]],
    ['settings_5f_5fwork_5fdir_2ecpp',['settings__work_dir.cpp',['../settings____work__dir_8cpp.html',1,'']]],
    ['sixth_5fcolumn_5flength',['SIXTH_COLUMN_LENGTH',['../scf____report__scf__iterations_8cpp.html#ac361e60d6495029bd01d6222552b7138',1,'scf__report_scf_iterations.cpp']]],
    ['size',['size',['../basis__set____size_8cpp.html#a19fe2badf5d2c1f02ede61763d0357a3',1,'size():&#160;basis_set__size.cpp'],['../file__system____size_8cpp.html#aa5700d96289cb02d565f63c1f9348b74',1,'size():&#160;file_system__size.cpp']]],
    ['size_5fof_5f1st_5flayer',['size_of_1st_layer',['../array____size__of_8cpp.html#a5032ecc8beeaf139192f9771dc14610f',1,'array__size_of.cpp']]],
    ['size_5fof_5f2nd_5flayer',['size_of_2nd_layer',['../array____size__of_8cpp.html#a566e37c3b58113989440deced4e9c22d',1,'array__size_of.cpp']]],
    ['size_5fof_5fcolumn',['size_of_column',['../array____size__of_8cpp.html#a8bb55f97950145805eae110134ef8097',1,'array__size_of.cpp']]],
    ['size_5fof_5frow',['size_of_row',['../array____size__of_8cpp.html#ad75a523b9a0ca35d42e9348f2d62d508',1,'array__size_of.cpp']]],
    ['sort',['sort',['../classarray_3_01data__type_00_011_01_4.html#aed24f309732f0408f17cc954831133b0',1,'array&lt; data_type, 1 &gt;::sort()'],['../classarray_3_01data__type_00_011_01_4.html#aed24f309732f0408f17cc954831133b0',1,'array&lt; data_type, 1 &gt;::sort()'],['../sort_8cpp.html#a3897f5c964619f75b8c410bbedd491d1',1,'sort():&#160;sort.cpp']]],
    ['sort_2ecpp',['sort.cpp',['../sort_8cpp.html',1,'']]],
    ['space_5flength',['SPACE_LENGTH',['../globals_8hpp.html#a8d827ad8219243894f71f2369216bbea',1,'globals.hpp']]],
    ['speed_5fof_5flight',['speed_of_light',['../tools____speed__of__light_8cpp.html#abbe484ee8e2b690fd76114d0e3a6bcb7',1,'tools__speed_of_light.cpp']]],
    ['square_5fmodule',['square_module',['../math____square__module_8cpp.html#a0e53e8d3d310be4fcdc73866ae1b98b4',1,'square_module(const data_type &amp;a, const data_type &amp;b):&#160;math__square_module.cpp'],['../tools____square__module_8cpp.html#a0e53e8d3d310be4fcdc73866ae1b98b4',1,'square_module(const data_type &amp;a, const data_type &amp;b):&#160;tools__square_module.cpp']]],
    ['ssss',['ssss',['../namespaceeri.html#a508f19c8fb23a7dbf8dead11fbddee48a13e8b34ba260ddda3b16a0edb257c25a',1,'eri']]],
    ['stamp',['stamp',['../classlog__file__handler.html#a761abe7b5ff1eec2fec56ecc5c4fdeb5',1,'log_file_handler']]],
    ['standby_5fmode',['standby_mode',['../namespaceoption.html#a718f9dc10f6aa27fb9624738cd514c04aaf4b8222ef806d8271180c08f5d8928c',1,'option']]],
    ['standby_5fmode_5fon',['standby_mode_on',['../classsettings.html#a29d8d11350a2487b989cf1e25f5d099d',1,'settings']]],
    ['start',['start',['../timer____start_8cpp.html#a60de64d75454385b23995437f1d72669',1,'timer__start.cpp']]],
    ['start_5fiterations',['start_iterations',['../scf____start__iterations_8cpp.html#af01ded342fbff1464e207e7cf1b8643f',1,'scf__start_iterations.cpp']]],
    ['start_5fscf_5fiterations',['start_scf_iterations',['../lcao__wavefunction____start__scf__iterations_8cpp.html#a1dc1393679763c69b05dba558390934a',1,'lcao_wavefunction__start_scf_iterations.cpp']]],
    ['stime',['stime',['../classtimer.html#a462cc6bf091347020e315df18200e871',1,'timer']]],
    ['sto1g',['STO1G',['../globals_8hpp.html#a350a2d522a908612f3cdc57a884bb134',1,'globals.hpp']]],
    ['sto2g',['STO2G',['../globals_8hpp.html#a7d71086facc203bc8dc0ca716bf3b8d2',1,'globals.hpp']]],
    ['sto3g',['sto3g',['../classlcao__wavefunction_1_1sto3g.html#a012b591a6fb9f9e9322d76a6094d6690',1,'lcao_wavefunction::sto3g::sto3g()'],['../globals_8hpp.html#a7170c788cd3fee8d17ba5d271cf578d8',1,'STO3G():&#160;globals.hpp']]],
    ['sto3g',['sto3g',['../classlcao__wavefunction_1_1sto3g.html',1,'lcao_wavefunction']]],
    ['sto3g_2ehpp',['sto3g.hpp',['../sto3g_8hpp.html',1,'']]],
    ['sto3g_5flimit',['sto3g_limit',['../classbasis__set.html#a63f17d9bfb2530a53db83102f1e73bff',1,'basis_set']]],
    ['sto3g_5frange',['STO3G_RANGE',['../globals_8hpp.html#a79e0d5931430abb633cfa9aad16a5a85',1,'globals.hpp']]],
    ['sto_5f1g',['STO_1G',['../namespacebasis.html#a952a0bcb89bf546c23fe2ececaf859cba8532d8f66c6f3c7654f562acffbb6372',1,'basis']]],
    ['sto_5f2g',['STO_2G',['../namespacebasis.html#a952a0bcb89bf546c23fe2ececaf859cbad22ff792d4102c253ede04cefc0aeaad',1,'basis']]],
    ['sto_5f3g',['STO_3G',['../namespacebasis.html#a952a0bcb89bf546c23fe2ececaf859cbab704f45d99ebd06551566bf5c8907d1a',1,'basis']]],
    ['sto_5f6g',['STO_6G',['../namespacebasis.html#a952a0bcb89bf546c23fe2ececaf859cba4c4f09939b1393bca42c511efb23c9d4',1,'basis']]],
    ['stop',['stop',['../timer____stop_8cpp.html#a8c528baf37154d347366083f0f816846',1,'timer__stop.cpp']]],
    ['stopped',['stopped',['../classtimer.html#af20d8ea43c316a167f84b5c3c860fb20',1,'timer']]],
    ['stream_5fready',['stream_ready',['../classfile__system.html#a5f2d565143b837695d2b30f4a7e3e6e3',1,'file_system']]],
    ['sub_5fshell_5f1s',['SUB_SHELL_1s',['../globals_8hpp.html#a68c371ea17a89bc6930fa80275220bb5',1,'globals.hpp']]],
    ['sub_5fshell_5f2px',['SUB_SHELL_2px',['../globals_8hpp.html#a4987ad825ae5ecb6905ab261f0160676',1,'globals.hpp']]],
    ['sub_5fshell_5f2py',['SUB_SHELL_2py',['../globals_8hpp.html#afb904aca679b4547c2bef63da9261187',1,'globals.hpp']]],
    ['sub_5fshell_5f2pz',['SUB_SHELL_2pz',['../globals_8hpp.html#ad8f0416c18d212cda2c1fc343722b762',1,'globals.hpp']]],
    ['sub_5fshell_5f2s',['SUB_SHELL_2s',['../globals_8hpp.html#ac09dbd3b68feb039bef68a49f4051404',1,'globals.hpp']]],
    ['sub_5fshell_5fd',['SUB_SHELL_d',['../globals_8hpp.html#a238092f59f472d5992def6e0c1cad68c',1,'globals.hpp']]],
    ['sub_5fshell_5ff',['SUB_SHELL_f',['../globals_8hpp.html#a7d2f7dd5ca0ffa8fab68521f63baa22c',1,'globals.hpp']]],
    ['sub_5fshell_5fp',['SUB_SHELL_p',['../globals_8hpp.html#a90b3670d13af364a9189a491ba671177',1,'globals.hpp']]],
    ['sub_5fshell_5fs',['SUB_SHELL_s',['../globals_8hpp.html#ad988d7d2aaeffcf29d35e2144ddc96bb',1,'globals.hpp']]],
    ['sub_5fshells',['sub_shells',['../periodic__table____sub__shells_8cpp.html#ac765703ee181d02ce0faa474af621df0',1,'periodic_table__sub_shells.cpp']]],
    ['subtraction_2ecpp',['subtraction.cpp',['../subtraction_8cpp.html',1,'']]],
    ['sum',['sum',['../classarray_3_01data__type_00_011_01_4.html#adbfa82dde609c6d4000a6a3ae28c5d34',1,'array&lt; data_type, 1 &gt;::sum()'],['../classarray_3_01data__type_00_011_01_4.html#adbfa82dde609c6d4000a6a3ae28c5d34',1,'array&lt; data_type, 1 &gt;::sum()'],['../sum_8cpp.html#a675941e3b96132778f914c38ca448a50',1,'sum():&#160;sum.cpp']]],
    ['sum_2ecpp',['sum.cpp',['../sum_8cpp.html',1,'']]],
    ['symbol',['symbol',['../periodic__table____symbol_8cpp.html#af25e91df270bfd924d97d4d8a253944f',1,'periodic_table__symbol.cpp']]],
    ['system_5fcom_5fready',['system_com_ready',['../classmolecular__system.html#a5422abbae199a65089b94c336a1063c7',1,'molecular_system']]],
    ['system_5fcom_5fx',['system_com_x',['../classmolecular__system.html#a5fb872defed8ce55b411b7d72a6ba03f',1,'molecular_system']]],
    ['system_5fcom_5fy',['system_com_y',['../classmolecular__system.html#a91e66936e0943e620e477857b77c6d86',1,'molecular_system']]],
    ['system_5fcom_5fz',['system_com_z',['../classmolecular__system.html#a68e971cc7bb55cc5e67cccb004f8bfdf',1,'molecular_system']]],
    ['system_5fname',['system_name',['../classmolecular__system.html#a294b7c6783289e49ab0bbf59a8093f74',1,'molecular_system']]],
    ['system_5ftime',['system_time',['../namespaceoption.html#a718f9dc10f6aa27fb9624738cd514c04a0b1d4a661a977df0c09fba5b9b10200a',1,'option::system_time()'],['../timer____system__time_8cpp.html#a2e84ee162437c9059f3f943c5d1a0236',1,'system_time():&#160;timer__system_time.cpp']]]
  ];
  