text: from reportseff import job_collection
  from reportseff.job import Job
  import pytest
  
  
  @pytest.fixture
  def jobs():
      return job_collection.Job_Collection()
  
  
  def test_get_columns(jobs):
      assert jobs.get_columns() == (
          'JobIDRaw,JobID,State,AllocCPUS,TotalCPU,Elapsed,Timelimit,'
          'REQMEM,MaxRSS,NNodes,NTasks'
      ).split(',')
  
  
  def test_get_jobs(jobs):
      assert jobs.get_jobs() == []
  
      jobs.jobs = {
          '1_1': Job('1', '1_1', None),
          '1_2': Job('1', '1_2', None),
          '2_2': Job('2', '2_2', None),
      }
      assert jobs.get_jobs() == '1,2'.split(',')
  
  
  def test_set_out_dir_dir_handling(jobs, mocker):
      # dir handling
      mock_cwd = mocker.patch('reportseff.job_collection.os.getcwd',
                              return_value='/dir/path/')
      mock_real = mocker.patch('reportseff.job_collection.os.path.realpath',
                               return_value='/dir/path2/')
      mock_exists = mocker.patch('reportseff.job_collection.os.path.exists',
                                 return_value=False)
  
      with pytest.raises(ValueError) as e:
          jobs.set_out_dir('')
      assert '/dir/path/ does not exist!' in str(e)
      mock_cwd.assert_called_once()
      mock_real.assert_not_called()
      mock_exists.assert_called_once_with('/dir/path/')
  
      mock_cwd.reset_mock()
      mock_real.reset_mock()
      mock_exists.reset_mock()
  
      with pytest.raises(ValueError) as e:
          jobs.set_out_dir('pwd')
      assert '/dir/path2/ does not exist!' in str(e)
      mock_cwd.assert_not_called()
      mock_real.assert_called_once_with('pwd')
      mock_exists.assert_called_once_with('/dir/path2/')
  
  
  def test_set_jobs(jobs, mocker):
      with pytest.raises(ValueError) as e:
          jobs.set_jobs(('asdf', 'qwer', 'zxcv', 'asdf111'))
      assert 'No valid jobs provided!' in str(e)
  
      jobs.set_jobs(('asdf', '1', '1_1', 'asdf_1_2', '1_asdf_2'))
      assert jobs.jobs == {
          '1': Job('1', '1', None),
          '1_1': Job('1', '1_1', None),
          '1_2': Job('1', '1_2', 'asdf_1_2'),
          '2': Job('2', '2', '1_asdf_2'),
      }
  
      # test if single arg is a dir check if
      jobs.jobs = {}
      mocker.patch('reportseff.job_collection.os.path.isdir',
                   return_value=False)
      with pytest.raises(ValueError) as e:
          jobs.set_jobs(('dir',))
      assert 'No valid jobs provided!' in str(e)
  
      jobs.set_jobs(('1',))
      assert jobs.jobs == {
          '1': Job('1', '1', None),
      }
  
      mocker.patch('reportseff.job_collection.os.path.isdir',
                   return_value=True)
      mock_set_out = mocker.patch.object(job_collection.Job_Collection,
                                         'set_out_dir')
  
      jobs.set_jobs(())
      mock_set_out.assert_called_once_with('')
  
      mock_set_out.reset_mock()
      jobs.set_jobs(('dir',))
      mock_set_out.assert_called_once_with('dir')
  
  
  def test_process_line(jobs, mocker):
      jobs.jobs = {
          '24371655': Job('24371655', '24371655', 'test_24371655')
      }
      mock_update = mocker.patch.object(Job, 'update')
      jobs.process_entry(
          dict(zip(jobs.get_columns(),
                   '24371655|24371655|COMPLETED|1|'
                   '01:29:47|01:29:56|03:00:00|1Gn||1|'.split('|'))))
      jobs.process_entry(
          dict(zip(jobs.get_columns(),
                   '24371655.batch|24371655.batch|COMPLETED|1|'
                   '01:29:47|01:29:56||1Gn|495644K|1|1'.split('|'))))
      jobs.process_entry(
          dict(zip(jobs.get_columns(),
                   '24371655.extern|24371655.extern|COMPLETED|1|'
                   '00:00:00|01:29:56||1Gn|1372K|1|1'.split('|'))))
  
      assert mock_update.call_args_list == [
          mocker.call({
              'JobIDRaw': '24371655',
              'JobID': '24371655',
              'State': 'COMPLETED',
              'AllocCPUS': '1',
              'REQMEM': '1Gn',
              'TotalCPU': '01:29:47',
              'Elapsed': '01:29:56',
              'Timelimit': '03:00:00',
              'MaxRSS': '',
              'NNodes': '1',
              'NTasks': ''
          }),
          mocker.call({
              'JobIDRaw': '24371655.batch',
              'JobID': '24371655.batch',
              'State': 'COMPLETED',
              'AllocCPUS': '1',
              'REQMEM': '1Gn',
              'TotalCPU': '01:29:47',
              'Elapsed': '01:29:56',
              'Timelimit': '',
              'MaxRSS': '495644K',
              'NNodes': '1',
              'NTasks': '1'
          }),
          mocker.call({
              'JobIDRaw': '24371655.extern',
              'JobID': '24371655.extern',
              'State': 'COMPLETED',
              'AllocCPUS': '1',
              'REQMEM': '1Gn',
              'TotalCPU': '00:00:00',
              'Elapsed': '01:29:56',
              'Timelimit': '',
              'MaxRSS': '1372K',
              'NNodes': '1',
              'NTasks': '1'
          }),
      ]
  
  
  def test_set_out_dir(jobs, mocker):
      mocker.patch('reportseff.job_collection.os.path.realpath',
                   side_effect=lambda x: f'/dir/path2/{x}')
      mocker.patch('reportseff.job_collection.os.path.exists',
                   return_value=True)
      mocker.patch('reportseff.job_collection.os.path.isfile',
                   return_value=True)
  
      mocker.patch('reportseff.job_collection.os.listdir',
                   return_value=[])
      with pytest.raises(ValueError) as e:
          jobs.set_out_dir('test')
      assert '/dir/path2/test contains no files!' in str(e)
  
      mocker.patch('reportseff.job_collection.os.listdir',
                   return_value=['asdf'])
      with pytest.raises(ValueError) as e:
          jobs.set_out_dir('test')
      assert '/dir/path2/test contains no valid output files!' in str(e)
  
      mocker.patch('reportseff.job_collection.os.listdir',
                   return_value=['asdf',
                                 'base_1',
                                 'base_1_1.out',
                                 'base_2_1',  # overwritten
                                 'base_2_1.out'])
      jobs.set_out_dir('test')
  
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_1'),
          '1_1': Job('1', '1_1', 'base_1_1.out'),
          '2_1': Job('2', '2_1', 'base_2_1.out'),
      }
  
  
  def test_process_seff_file(jobs):
      # no matches
      jobs.process_seff_file('')
      assert jobs.jobs == {}
  
      jobs.process_seff_file('base_name')
      assert jobs.jobs == {}
  
      # simple job file
      jobs.process_seff_file('base_name_1')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name_1')
      }
  
      # with .out
      jobs.process_seff_file('base_name_2.out')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name_1'),
          '2': Job('2', '2', 'base_name_2.out')
      }
  
      # with array
      jobs.process_seff_file('base_name_3_1')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name_1'),
          '2': Job('2', '2', 'base_name_2.out'),
          '3_1': Job('3', '3_1', 'base_name_3_1')
      }
  
      # array and .out
      jobs.process_seff_file('base_name_4_1.out')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name_1'),
          '2': Job('2', '2', 'base_name_2.out'),
          '3_1': Job('3', '3_1', 'base_name_3_1'),
          '4_1': Job('4', '4_1', 'base_name_4_1.out')
      }
  
      jobs.jobs = {}
      # slight mistakes
      jobs.process_seff_file('base_name_4_1out')
      assert jobs.jobs == {}
  
      jobs.process_seff_file('base_name4_1.out')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name4_1.out')
      }
  
      jobs.process_seff_file('base_name_0_4_1.out')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name4_1.out'),
          '4_1': Job('4', '4_1', 'base_name_0_4_1.out'),
      }
  
      jobs.process_seff_file('slurm-24825624.out')
      assert jobs.jobs == {
          '1': Job('1', '1', 'base_name4_1.out'),
          '4_1': Job('4', '4_1', 'base_name_0_4_1.out'),
          '24825624': Job('24825624', '24825624', 'slurm-24825624.out')
      }
  
  
  def test_add_job(jobs):
      jobs.add_job('j1', 'jid1')
      assert jobs.jobs == {
          'jid1': Job('j1', 'jid1', None)
      }
  
      # overwrite based on jobid
      jobs.add_job('j2', 'jid1', 'file')
      assert jobs.jobs == {
          'jid1': Job('j2', 'jid1', 'file')
      }
  
      # another job, different jid
      jobs.add_job('j2', 'jid2', 'file')
      assert jobs.jobs == {
          'jid1': Job('j2', 'jid1', 'file'),
          'jid2': Job('j2', 'jid2', 'file')
      }
  
  
  def test_get_sorted_jobs(jobs, mocker):
      jobs.add_job('j3', 'jid3')
      jobs.add_job('j1', 'jid1')
      jobs.add_job('j2', 'jid2')
      jobs.add_job('j13', 'jid13')
  
      assert jobs.get_sorted_jobs(False) == [
          Job('j1', 'jid1', None),
          Job('j2', 'jid2', None),
          Job('j3', 'jid3', None),
          Job('j13', 'jid13', None)
      ]
  
      jobs.jobs = {}
      jobs.add_job('j3', 'jid3', 'file3')
      jobs.add_job('j1', 'jid1', 'file12')
      jobs.add_job('j2', 'jid2', 'file234')
      jobs.add_job('j13', 'jid13')
      jobs.add_job('j14', 'jid14', 'nothing')
  
      # make all non-none files exist
      mocker.patch('reportseff.job_collection.os.path.exists',
                   side_effect=lambda x: x is not None and x != 'dir/nothing')
      # replace mtime with the length of the filename
      mocker.patch('reportseff.job_collection.os.path.getmtime',
                   side_effect=lambda x: len(x))
  
      # still uses other sorting, no dir_name set
      assert jobs.get_sorted_jobs(True) == [
          Job('j13', 'jid13', None),
          Job('j2', 'jid2', 'file234'),
          Job('j14', 'jid14', 'nothing'),
          Job('j1', 'jid1', 'file12'),
          Job('j3', 'jid3', 'file3'),
      ]
  
      jobs.dir_name = 'dir'  # now dir/nothing doesn't exist
      assert jobs.get_sorted_jobs(True) == [
          Job('j14', 'jid14', 'nothing'),
          Job('j13', 'jid13', None),
          Job('j2', 'jid2', 'file234'),
          Job('j1', 'jid1', 'file12'),
          Job('j3', 'jid3', 'file3'),
      ]
  
  
  def test_process_entry_array_user(jobs):
      jobs.process_entry(
          {'AllocCPUS': '1', 'Elapsed': '00:00:00',
           'JobID': '14729857_[737-999]', 'JobIDRaw': '14729857',
           'MaxRSS': '', 'NNodes': '1', 'REQMEM': '50Gn', 'State': 'PENDING',
           'TotalCPU': '00:00:00'}, user_provided=True)
      expected_job = Job('14729857', '14729857_[737-999]', None)
      expected_job.state = 'PENDING'
      assert jobs.jobs == {
          '14729857_[737-999]': expected_job
      }
  