text: import re
  from os import path
  from setuptools import setup, find_packages
  
  
  here = path.abspath(path.dirname(__file__))
  
  with open(path.join(here, 'README.md'), encoding='utf-8') as fh:
      long_description = fh.read()
  
  with open(path.join(here, 'gilda', '__init__.py'), 'r') as fh:
      for line in fh.readlines():
          match = re.match(r'__version__ = \'(.+)\'', line)
          if match:
              gilda_version = match.groups()[0]
              break
      else:
          raise ValueError('Could not get version from gilda/__init__.py')
  
  
  
  setup(name='gilda',
        version=gilda_version,
        description=('Grounding for biomedical entities with contextual '
                     'disambiguation'),
        long_description=long_description,
        long_description_content_type='text/markdown',
        url='https://github.com/indralab/gilda',
        author='Benjamin M. Gyori, Harvard Medical School',
        author_email='benjamin_gyori@hms.harvard.edu',
        classifiers=[
            'Development Status :: 4 - Beta',
            'Programming Language :: Python :: 3.5',
            'Programming Language :: Python :: 3.6',
            'Programming Language :: Python :: 3.7'
        ],
        packages=find_packages(),
        install_requires=['regex', 'adeft>=0.4.0', 'boto3', 'flask',
                          'flask-wtf', 'flask-bootstrap', 'obonet'],
        extras_require={'test': ['nose', 'coverage'],
                        'terms': ['indra'],
                        'benchmarks': ['pandas', 'requests']},
        keywords=['nlp', 'biology']
        )
  