text: #!/usr/bin/python
  
  from aln_helpers import parse_alignment
  
  fp = "/usr/map_viruses/tests/example.aln"
  
  protein_abund = parse_alignment(fp)
  
  # There are 11 proteins present
  assert len(protein_abund) == 11
  
  for prot in protein_abund:
      for k in ["coverage", "bitscore", "depth", "pctid", "alen"]:
          assert prot[k] > 0
          assert isinstance(prot[k], float)
      for k in ["nreads", "length"]:
          assert prot[k] > 0
          assert isinstance(prot[k], int)
      assert isinstance(prot["protein"], str)
  
  print("Success")
  