text: from sequana import PantherEnrichment
  from easydev import TempFile
  import pandas as pd
  import pytest
  
  from . import test_dir
  
  @pytest.mark.xfail(reason="too slow or service may be down")
  def test_panther():
      up = pd.read_csv(f"{test_dir}/data/ecoli_up_gene.csv")
      down = pd.read_csv(f"{test_dir}data/ecoli_down_gene.csv")  
      up = list(up.Name)
      down = list(down.Name)
  
      up = up[0:200]
      down = down[0:200]
  
      gene_lists = {'up': up, 'down': down, 'all': up+down}
  
      pe = PantherEnrichment(gene_lists, log2_fc_threshold=0, taxon=83333)
      pe = PantherEnrichment(gene_lists, fc_threshold=1, taxon=83333)
  
      pe.compute_enrichment(ontologies=["GO:0003674"],
          correction="bonferroni")
  
      # too slow or fails ith uniprot 404 from time to time
      #pe.get_functional_classification(pe.mygenes_up, 83333)
  
      ontologies = ["GO:0003674", "GO:0008150", "GO:0005575"]
  
      pe.compute_enrichment(  ontologies=ontologies)
  
      df = pe.plot_go_terms("up", ontologies=ontologies, compute_levels=False)
      df = pe.plot_go_terms("up", ontologies=ontologies, compute_levels=False, log=True)
      df = pe.plot_go_terms("up", ontologies=ontologies, compute_levels=False, log=True,
          include_negative_enrichment=True)
  
      pe.plot_piechart(df) 
  
  