text: #!/usr/bin/python3
  
  import shasta
  
  import GetConfig
  config = GetConfig.getConfig()
  
  a = shasta.Assembler()
  a.accessMarkers()
  a.accessMarkerGraphVertices()
  a.accessMarkerGraphReverseComplementVertex()
  a.accessMarkerGraphEdges()
  a.accessMarkerGraphReverseComplementEdge()
  a.createMode1AssemblyGraph(
      minEdgeCoverage = int(config['MarkerGraph']['minEdgeCoverage']),
      minEdgeCoveragePerStrand = int(config['MarkerGraph']['minEdgeCoveragePerStrand']))
  
  
  
  