text: /**
   * UGENE - Integrated Bioinformatics Tools.
   * Copyright (C) 2008-2020 UniPro <ugene@unipro.ru>
   * http://ugene.net
   *
   * This program is free software; you can redistribute it and/or
   * modify it under the terms of the GNU General Public License
   * as published by the Free Software Foundation; either version 2
   * of the License, or (at your option) any later version.
   *
   * This program is distributed in the hope that it will be useful,
   * but WITHOUT ANY WARRANTY; without even the implied warranty of
   * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
   * GNU General Public License for more details.
   *
   * You should have received a copy of the GNU General Public License
   * along with this program; if not, write to the Free Software
   * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston,
   * MA 02110-1301, USA.
   */
  
  #ifndef _U2_MEGER_BAM_WORKER_H_
  #define _U2_MEGER_BAM_WORKER_H_
  
  #include <U2Core/GUrl.h>
  
  #include <U2Lang/LocalDomain.h>
  #include <U2Lang/WorkflowUtils.h>
  
  namespace U2 {
  namespace LocalWorkflow {
  
  class MergeBamPrompter;
  typedef PrompterBase<MergeBamPrompter> MergeBamBase;
  
  class MergeBamPrompter : public MergeBamBase {
      Q_OBJECT
  public:
      MergeBamPrompter(Actor *p = 0)
          : MergeBamBase(p) {
      }
  
  protected:
      QString composeRichDoc();
  };    //MergeBamPrompter
  
  class MergeBamWorker : public BaseWorker {
      Q_OBJECT
  public:
      MergeBamWorker(Actor *a);
      void init();
      Task *tick();
      void cleanup();
  
  private:
      IntegralBus *inputUrlPort;
      IntegralBus *outputUrlPort;
      QString outputDir;
      QStringList urls;
  public slots:
      void sl_taskFinished(Task *task);
  
  private:
      QString takeUrl();
      QString getOutputName(const QString &fileUrl);
      void sendResult(const QString &url);
  };    //MergeBamWorker
  
  class MergeBamWorkerFactory : public DomainFactory {
      static const QString ACTOR_ID;
  
  public:
      static void init();
      MergeBamWorkerFactory()
          : DomainFactory(ACTOR_ID) {
      }
      Worker *createWorker(Actor *a) {
          return new MergeBamWorker(a);
      }
  };    //MergeBamWorkerFactory
  
  }    // namespace LocalWorkflow
  }    // namespace U2
  
  #endif    //_U2_MEGER_BAM_WORKER_H_
  