text: import os
  
  HOME = '/data/dnadiag'
  
  dbdir = os.path.join(HOME,  'databases', 'cnv')
  outputdir = os.path.join(HOME,  'cnvoutput')
  pipelinedir = os.path.join(HOME, 'ngstargets')
  
  patientinfo = os.path.join(HOME,  'databases', 'patientinfo.sqlite')
  
  dbgeneral = 'general.sqlite'
  poscontable = 'poscontrols'
  badsampletable = 'badsamples'
  badregiontable = 'toexclude'
  
  