text: /* codeBlast.c was originally generated by the autoSql program, which also 
   * generated codeBlast.h and codeBlast.sql.  This module links the database and
   * the RAM representation of objects. */
  
  /* Copyright (C) 2014 The Regents of the University of California 
   * See kent/LICENSE or http://genome.ucsc.edu/license/ for licensing information. */
  
  #include "common.h"
  #include "linefile.h"
  #include "dystring.h"
  #include "jksql.h"
  #include "codeBlast.h"
  
  
  void codeBlastStaticLoad(char **row, struct codeBlast *ret)
  /* Load a row from codeBlast table into ret.  The contents of ret will
   * be replaced at the next call to this function. */
  {
  
  ret->bin = sqlSigned(row[0]);
  ret->chrom = row[1];
  ret->chromStart = sqlUnsigned(row[2]);
  ret->chromEnd = sqlUnsigned(row[3]);
  ret->name = row[4];
  ret->score = sqlUnsigned(row[5]);
  strcpy(ret->strand, row[6]);
  ret->code = row[7];
  }
  
  struct codeBlast *codeBlastLoad(char **row)
  /* Load a codeBlast from row fetched with select * from codeBlast
   * from database.  Dispose of this with codeBlastFree(). */
  {
  struct codeBlast *ret;
  
  AllocVar(ret);
  ret->bin = sqlSigned(row[0]);
  ret->chrom = cloneString(row[1]);
  ret->chromStart = sqlUnsigned(row[2]);
  ret->chromEnd = sqlUnsigned(row[3]);
  ret->name = cloneString(row[4]);
  ret->score = sqlUnsigned(row[5]);
  strcpy(ret->strand, row[6]);
  ret->code = cloneString(row[7]);
  return ret;
  }
  
  struct codeBlast *codeBlastLoadAll(char *fileName) 
  /* Load all codeBlast from a whitespace-separated file.
   * Dispose of this with codeBlastFreeList(). */
  {
  struct codeBlast *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[8];
  
  while (lineFileRow(lf, row))
      {
      el = codeBlastLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct codeBlast *codeBlastLoadAllByChar(char *fileName, char chopper) 
  /* Load all codeBlast from a chopper separated file.
   * Dispose of this with codeBlastFreeList(). */
  {
  struct codeBlast *list = NULL, *el;
  struct lineFile *lf = lineFileOpen(fileName, TRUE);
  char *row[8];
  
  while (lineFileNextCharRow(lf, chopper, row, ArraySize(row)))
      {
      el = codeBlastLoad(row);
      slAddHead(&list, el);
      }
  lineFileClose(&lf);
  slReverse(&list);
  return list;
  }
  
  struct codeBlast *codeBlastCommaIn(char **pS, struct codeBlast *ret)
  /* Create a codeBlast out of a comma separated string. 
   * This will fill in ret if non-null, otherwise will
   * return a new codeBlast */
  {
  char *s = *pS;
  
  if (ret == NULL)
      AllocVar(ret);
  ret->bin = sqlSignedComma(&s);
  ret->chrom = sqlStringComma(&s);
  ret->chromStart = sqlUnsignedComma(&s);
  ret->chromEnd = sqlUnsignedComma(&s);
  ret->name = sqlStringComma(&s);
  ret->score = sqlUnsignedComma(&s);
  sqlFixedStringComma(&s, ret->strand, sizeof(ret->strand));
  ret->code = sqlStringComma(&s);
  *pS = s;
  return ret;
  }
  
  void codeBlastFree(struct codeBlast **pEl)
  /* Free a single dynamically allocated codeBlast such as created
   * with codeBlastLoad(). */
  {
  struct codeBlast *el;
  
  if ((el = *pEl) == NULL) return;
  freeMem(el->chrom);
  freeMem(el->name);
  freeMem(el->code);
  freez(pEl);
  }
  
  void codeBlastFreeList(struct codeBlast **pList)
  /* Free a list of dynamically allocated codeBlast's */
  {
  struct codeBlast *el, *next;
  
  for (el = *pList; el != NULL; el = next)
      {
      next = el->next;
      codeBlastFree(&el);
      }
  *pList = NULL;
  }
  
  void codeBlastOutput(struct codeBlast *el, FILE *f, char sep, char lastSep) 
  /* Print out codeBlast.  Separate fields with sep. Follow last field with lastSep. */
  {
  fprintf(f, "%d", el->bin);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->chrom);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  fprintf(f, "%u", el->chromStart);
  fputc(sep,f);
  fprintf(f, "%u", el->chromEnd);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->name);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  fprintf(f, "%u", el->score);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->strand);
  if (sep == ',') fputc('"',f);
  fputc(sep,f);
  if (sep == ',') fputc('"',f);
  fprintf(f, "%s", el->code);
  if (sep == ',') fputc('"',f);
  fputc(lastSep,f);
  }
  
  /* -------------------------------- End autoSql Generated Code -------------------------------- */
  
  