def METHOD_NAME(top, section, verbose):
    """Parse atom of lj style from mol2 file."""
    for line in section:
        if line.strip():
            content = line.split()
            position = [float(x) for x in content[2:5]] * u.Å
            try:
                charge = float(content[8])
            except IndexError:
                if verbose:
                    warnings.warn(
                        f"No charge was detected for site {content[1]} with index {content[0]}"
                    )
                charge = None
            atom = Atom(
                name=content[1],
                position=position.to("nm"),
                charge=charge,
                residue=(content[7], int(content[6])),
            )
            top.add_site(atom)