MchcsCohortLibrary { public CohortDefinition pcrInitialTest() { Concept contexualStatus = Dictionary.getConcept(Dictionary.TEXT_CONTEXT_STATUS); Concept initial = Dictionary.getConcept(Dictionary.TEST_STATUS_INITIAL); return commonCohorts.hasObs(contexualStatus,initial); }  CohortDefinition pcrWithinMonths(); CohortDefinition pcrInitialTest(); CohortDefinition age2Months(); CohortDefinition pcrInitialWithin2Months(); CohortDefinition ageBetween3And8Months(); CohortDefinition pcrInitialBetween3To8Months(); CohortDefinition serologyAntBodyTest(); CohortDefinition ageBetween9And12Months(); CohortDefinition serologyAntBodyTestBetween9And12Months(); CohortDefinition pcrBetween9And12MonthsAge(); CohortDefinition totalHeitestedBy12Months(); CohortDefinition detectedConfirmedStatus(); CohortDefinition pcrConfirmedPositive2Months(); CohortDefinition pcrConfirmedPositiveBetween3To8Months(); CohortDefinition pcrConfirmedPositiveBetween9To12Months(); CohortDefinition pcrTotalConfirmedPositive(); CohortDefinition ageAt6Months(); CohortDefinition exclusiveBreastFeeding(); CohortDefinition exclusiveReplacementFeeding(); CohortDefinition mixedFeeding(); CohortDefinition exclusiveBreastFeedingAtSixMonths(); CohortDefinition exclusiveReplacementFeedingAtSixMonths(); CohortDefinition mixedFeedingAtSixMonths(); CohortDefinition totalExposedAgedSixMoths(); CohortDefinition motherOnTreatmentAndBreastFeeding(); CohortDefinition motherOnTreatmentAndNotBreastFeeding(); CohortDefinition motherOnTreatmentAndNotBreastFeedingUnknown(); CohortDefinition totalBreastFeedingMotherOnTreatment(); CohortDefinition hivExposedInfants(); CohortDefinition hivExposedInfantsWithin2Months(); CohortDefinition hivExposedInfantsEligibleForCTX(); CohortDefinition hivExposedInfantsWithin2MonthsAndEligibleForCTX(); CohortDefinition scheduledVisitsInCWC();  }
@Test public void pcrInitialTest_shouldReturnInfantPatientsWithPcrInitialTest() throws Exception { Concept contexualStatus = Dictionary.getConcept(Dictionary.TEXT_CONTEXT_STATUS); Concept initial = Dictionary.getConcept(Dictionary.TEST_STATUS_INITIAL); Concept complete = Dictionary.getConcept(Dictionary.CONFIRMATION_STATUS); TestUtils.saveObs(TestUtils.getPatient(6), contexualStatus, initial, TestUtils.date(2013, 6, 10)); TestUtils.saveObs(TestUtils.getPatient(7), contexualStatus, complete, TestUtils.date(2013, 6, 15)); CohortDefinition cd =mchcsCohortLibrary.pcrInitialTest(); EvaluatedCohort evaluated = Context.getService(CohortDefinitionService.class).evaluate(cd, context); ReportingTestUtils.assertCohortEquals(Arrays.asList(6), evaluated); }