Input: [Name] Tmem164-002 [Transcript ID] ENSMUST00000112896 [bp] 5224 [Protein] 296aa [Translation ID] ENSMUSP00000108517 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS30451 [UniProt] Q6PHN7 [RefSeq] NM_001199360 NP_001186289 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-001 [Transcript ID] ENSMUST00000087333 [bp] 5149 [Protein] 296aa [Translation ID] ENSMUSP00000084591 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS30451 [UniProt] Q6PHN7 [RefSeq] NM_177592 NP_808260 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-005 [Transcript ID] ENSMUST00000101198 [bp] 4443 [Protein] 148aa [Translation ID] ENSMUSP00000098759 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS57778 [UniProt] A2AH99 [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-003 [Transcript ID] ENSMUST00000112889 [bp] 1742 [Protein] 148aa [Translation ID] ENSMUSP00000108510 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS57778 [UniProt] A2AH99 [RefSeq] NM_001199357 NP_001186286 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-008 [Transcript ID] ENSMUST00000112888 [bp] 4221 [Protein] 82aa [Translation ID] ENSMUSP00000108509 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2AHA2 [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-004 [Transcript ID] ENSMUST00000112891 [bp] 1654 [Protein] 133aa [Translation ID] ENSMUSP00000108512 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A2AH98 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-006 [Transcript ID] ENSMUST00000151914 [bp] 1369 [Protein] 121aa [Translation ID] ENSMUSP00000116443 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F7AY95 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-007 [Transcript ID] ENSMUST00000133634 [bp] 2527 [Protein] 296aa [Translation ID] ENSMUSP00000138503 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] CCDS30451 [UniProt] Q6PHN7 [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] Tmem164-009 [Transcript ID] ENSMUST00000124211 [bp] 441 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Mus musculus - Protein summary - Transcript: Tmem164-001 (ENSMUST00000087333)


Input: [Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Variation table - Transcript: PDPK1-015 (ENST00000566659)


Input: [Name] PTS-001 [Transcript ID] ENST00000280362 [bp] 935 [Protein] 145aa [Translation ID] ENSP00000280362 [CCDS] CCDS8359 [UniProt] Q03393 [RefSeq] NM_000317 NP_000308 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-008 [Transcript ID] ENST00000524931 [bp] 696 [Protein] 77aa [Translation ID] ENSP00000434688 [CCDS] - [UniProt] E9PNN3 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-005 [Transcript ID] ENST00000525803 [bp] 625 [Protein] 61aa [Translation ID] ENSP00000431750 [CCDS] - [UniProt] E9PJM0 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-002 [Transcript ID] ENST00000531673 [bp] 986 [Protein] 55aa [Translation ID] ENSP00000433469 [CCDS] - [UniProt] E9PKY8 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-004 [Transcript ID] ENST00000528679 [bp] 846 [Protein] 55aa [Translation ID] ENSP00000435895 [CCDS] - [UniProt] E9PKY8 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-003 [Transcript ID] ENST00000525645 [bp] 1069 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-006 [Transcript ID] ENST00000527428 [bp] 646 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-007 [Transcript ID] ENST00000527635 [bp] 601 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] PTS-009 [Transcript ID] ENST00000531175 [bp] 430 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PTS-004 (ENST00000528679)


Input: [Name] CANT1-003 [Transcript ID] ENST00000302345 [bp] 3534 [Protein] 401aa [Translation ID] ENSP00000307674 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11760 [UniProt] A0A024R8U8 Q8WVQ1 [RefSeq] NM_001159773 NM_138793 NP_001153245 NP_620148 [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-201 [Transcript ID] ENST00000620915 [bp] 3337 [Protein] 401aa [Translation ID] ENSP00000477798 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11760 [UniProt] A0A024R8U8 Q8WVQ1 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-001 [Transcript ID] ENST00000392446 [bp] 3252 [Protein] 401aa [Translation ID] ENSP00000376241 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11760 [UniProt] A0A024R8U8 Q8WVQ1 [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-002 [Transcript ID] ENST00000591773 [bp] 1669 [Protein] 401aa [Translation ID] ENSP00000467437 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11760 [UniProt] A0A024R8U8 Q8WVQ1 [RefSeq] NM_001159772 NP_001153244 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-016 [Transcript ID] ENST00000588611 [bp] 900 [Protein] 118aa [Translation ID] ENSP00000465816 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EKW6 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-008 [Transcript ID] ENST00000588075 [bp] 881 [Protein] 76aa [Translation ID] ENSP00000465769 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EKT2 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-021 [Transcript ID] ENST00000586916 [bp] 769 [Protein] 61aa [Translation ID] ENSP00000467970 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EQT4 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-020 [Transcript ID] ENST00000590370 [bp] 614 [Protein] 65aa [Translation ID] ENSP00000466637 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EMT2 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-018 [Transcript ID] ENST00000591625 [bp] 599 [Protein] 15aa [Translation ID] ENSP00000467777 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EQD4 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-011 [Transcript ID] ENST00000592033 [bp] 502 [Protein] 38aa [Translation ID] ENSP00000467886 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EIP9 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-006 [Transcript ID] ENST00000591811 [bp] 466 [Protein] 38aa [Translation ID] ENSP00000464841 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EIP9 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-004 [Transcript ID] ENST00000592228 [bp] 1546 [Protein] 264aa [Translation ID] ENSP00000466743 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K7EN15 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-012 [Transcript ID] ENST00000591732 [bp] 578 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-025 [Transcript ID] ENST00000592887 [bp] 555 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-013 [Transcript ID] ENST00000587242 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] CANT1-005 [Transcript ID] ENST00000588096 [bp] 369 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: CANT1-004 (ENST00000592228)


Input: [Name] PHACTR1-005 [Transcript ID] ENST00000332995 [bp] 5332 [Protein] 580aa [Translation ID] ENSP00000329880 [CCDS] CCDS75401 [UniProt] Q9C0D0 [RefSeq] NM_001242648 NM_030948 NP_001229577 NP_112210 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-001 [Transcript ID] ENST00000379350 [bp] 4784 [Protein] 484aa [Translation ID] ENSP00000368655 [CCDS] - [UniProt] Q9C0D0 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-201 [Transcript ID] ENST00000415087 [bp] 2257 [Protein] 488aa [Translation ID] ENSP00000395948 [CCDS] - [UniProt] H0Y518 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-003 [Transcript ID] ENST00000379335 [bp] 943 [Protein] 144aa [Translation ID] ENSP00000368639 [CCDS] - [UniProt] Q4VY12 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-010 [Transcript ID] ENST00000379348 [bp] 795 [Protein] 169aa [Translation ID] ENSP00000368653 [CCDS] - [UniProt] Q5R356 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-006 [Transcript ID] ENST00000406205 [bp] 792 [Protein] 265aa [Translation ID] ENSP00000384760 [CCDS] - [UniProt] H0Y3U1 [RefSeq] - [Flags] 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-002 [Transcript ID] ENST00000434977 [bp] 760 [Protein] 230aa [Translation ID] ENSP00000412573 [CCDS] - [UniProt] H0Y7G2 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-004 [Transcript ID] ENST00000379329 [bp] 707 [Protein] 140aa [Translation ID] ENSP00000368633 [CCDS] - [UniProt] Q4VY13 [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-011 [Transcript ID] ENST00000482982 [bp] 699 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-009 [Transcript ID] ENST00000489548 [bp] 568 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] PHACTR1-008 [Transcript ID] ENST00000481706 [bp] 453 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: PHACTR1-004 (ENST00000379329)


Input: [Name] CNBP-001 [Transcript ID] ENST00000422453 [bp] 1664 [Protein] 177aa [Translation ID] ENSP00000410619 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3056 [UniProt] P62633 [RefSeq] NM_003418 NP_003409 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-010 [Transcript ID] ENST00000451728 [bp] 1641 [Protein] 178aa [Translation ID] ENSP00000399488 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46907 [UniProt] P62633 [RefSeq] NM_001127193 NP_001120665 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-002 [Transcript ID] ENST00000502976 [bp] 1626 [Protein] 170aa [Translation ID] ENSP00000421323 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS54637 [UniProt] P62633 [RefSeq] NM_001127196 NP_001120668 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-011 [Transcript ID] ENST00000446936 [bp] 1623 [Protein] 172aa [Translation ID] ENSP00000400444 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46908 [UniProt] P62633 [RefSeq] NM_001127194 NM_001127195 NP_001120666 NP_001120667 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-009 [Transcript ID] ENST00000441626 [bp] 1040 [Protein] 179aa [Translation ID] ENSP00000410769 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46906 [UniProt] P62633 [RefSeq] NM_001127192 NP_001120664 [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-003 [Transcript ID] ENST00000504813 [bp] 1549 [Protein] 167aa [Translation ID] ENSP00000422110 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P62633 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-004 [Transcript ID] ENST00000500450 [bp] 1516 [Protein] 160aa [Translation ID] ENSP00000426223 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P62633 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-008 [Transcript ID] ENST00000512338 [bp] 502 [Protein] 114aa [Translation ID] ENSP00000424787 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6RAT4 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-006 [Transcript ID] ENST00000502372 [bp] 1026 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] CNBP-005 [Transcript ID] ENST00000507573 [bp] 641 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: CNBP (ENSG00000169714)


Input: [Name] PXYLP1-001 [Transcript ID] ENST00000286353 [bp] 3281 [Protein] 480aa [Translation ID] ENSP00000286353 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3116 [UniProt] Q8TE99 [RefSeq] NM_001037172 NP_001032249 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-003 [Transcript ID] ENST00000393010 [bp] 3160 [Protein] 480aa [Translation ID] ENSP00000376733 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3116 [UniProt] Q8TE99 [RefSeq] NM_152282 NP_689495 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL2 - APPRIS candidate principal isoform (CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-002 [Transcript ID] ENST00000502783 [bp] 2066 [Protein] 442aa [Translation ID] ENSP00000422558 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS63797 [UniProt] B7Z4T2 [RefSeq] NM_001282728 NP_001269657 [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-005 [Transcript ID] ENST00000508812 [bp] 4158 [Protein] 471aa [Translation ID] ENSP00000422901 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PDB7 [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-004 [Transcript ID] ENST00000504264 [bp] 1773 [Protein] 463aa [Translation ID] ENSP00000426877 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B7Z3R9 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-013 [Transcript ID] ENST00000512457 [bp] 569 [Protein] 131aa [Translation ID] ENSP00000423702 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6R928 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-006 [Transcript ID] ENST00000505013 [bp] 568 [Protein] 145aa [Translation ID] ENSP00000421271 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6RGE3 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-009 [Transcript ID] ENST00000514680 [bp] 478 [Protein] 95aa [Translation ID] ENSP00000426956 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6RE60 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-010 [Transcript ID] ENST00000513528 [bp] 797 [Protein] 26aa [Translation ID] ENSP00000426348 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] D6RDP0 [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-007 [Transcript ID] ENST00000514880 [bp] 629 [Protein] 26aa [Translation ID] ENSP00000425264 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] D6RDP0 [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-012 [Transcript ID] ENST00000505502 [bp] 479 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-014 [Transcript ID] ENST00000514263 [bp] 289 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-008 [Transcript ID] ENST00000511968 [bp] 684 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] PXYLP1-011 [Transcript ID] ENST00000513007 [bp] 582 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PXYLP1-003 (ENST00000393010)


Input: [Name] RAD51-001 [Transcript ID] ENST00000267868 [bp] 2449 [Protein] 339aa [Translation ID] ENSP00000267868 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10062 [RefSeq] NM_002875 NP_002866 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [UniProt]

Output: Q06609

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-002 [Transcript ID] ENST00000423169 [bp] 1611 [Protein] 280aa [Translation ID] ENSP00000406602 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53932 [RefSeq] NM_001164270 NP_001157742 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]

Output: Q06609

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-009 [Transcript ID] ENST00000382643 [bp] 1588 [Protein] 340aa [Translation ID] ENSP00000372088 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53931 [RefSeq] NM_001164269 NP_001157741 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]

Output: Q06609

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-008 [Transcript ID] ENST00000532743 [bp] 1515 [Protein] 340aa [Translation ID] ENSP00000433924 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53931 [RefSeq] NM_133487 NP_597994 [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]

Output: Q06609

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-003 [Transcript ID] ENST00000557850 [bp] 1397 [Protein] 242aa [Translation ID] ENSP00000454176 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [UniProt]

Output: Q06609

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-006 [Transcript ID] ENST00000526763 [bp] 625 [Protein] 75aa [Translation ID] ENSP00000431897 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]

Output: Q9NZG9

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-007 [Transcript ID] ENST00000527860 [bp] 566 [Protein] 172aa [Translation ID] ENSP00000432759 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4 [UniProt]

Output: E9PNT5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-004 [Transcript ID] ENST00000525066 [bp] 1545 [Protein] 151aa [Translation ID] ENSP00000431864 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [UniProt]

Output: E9PJ30

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-010 [Transcript ID] ENST00000531277 [bp] 658 [Protein] 100aa [Translation ID] ENSP00000436512 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [UniProt]

Output: E9PI54

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] RAD51-013 [Transcript ID] ENST00000533741 [bp] 425 [Protein] 65aa [Translation ID] ENSP00000433053 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [UniProt]

Output: H0YD61

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RAD51-001 (ENST00000267868)


Input: [Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)


Input: [Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Population comparison - Transcript: PDPK1-017 (ENST00000561962)