Input: [Name] GLRX-003 [Transcript ID] ENST00000507412 [bp] 3407 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: GLRX-002 (ENST00000379979)


Input: [Name] PHB-202 [Transcript ID] ENST00000614445 [bp] 1952 [Protein] 272aa [Translation ID] ENSP00000479488 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11548 [UniProt] A8K401 P35232 [RefSeq] NM_001281715 NP_001268644 [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-203 [Transcript ID] ENST00000617874 [bp] 1908 [Protein] 272aa [Translation ID] ENSP00000484113 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11548 [UniProt] A8K401 P35232 [RefSeq] NM_001281496 NP_001268425 [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-001 [Transcript ID] ENST00000300408 [bp] 1832 [Protein] 272aa [Translation ID] ENSP00000300408 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11548 [UniProt] A8K401 P35232 [RefSeq] NM_002634 NP_002625 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-201 [Transcript ID] ENST00000511832 [bp] 1509 [Protein] 155aa [Translation ID] ENSP00000425035 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS62244 [UniProt] P35232 [RefSeq] NM_001281497 NP_001268426 [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-002 [Transcript ID] ENST00000419140 [bp] 907 [Protein] 246aa [Translation ID] ENSP00000393320 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JW96 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-009 [Transcript ID] ENST00000504124 [bp] 796 [Protein] 216aa [Translation ID] ENSP00000426433 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PCW0 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-003 [Transcript ID] ENST00000446735 [bp] 732 [Protein] 201aa [Translation ID] ENSP00000407828 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JZ20 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-010 [Transcript ID] ENST00000512041 [bp] 694 [Protein] 202aa [Translation ID] ENSP00000422182 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7ESE2 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-007 [Transcript ID] ENST00000434917 [bp] 534 [Protein] 124aa [Translation ID] ENSP00000410680 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] D6RBK0 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-013 [Transcript ID] ENST00000508009 [bp] 451 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-015 [Transcript ID] ENST00000506273 [bp] 431 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-016 [Transcript ID] ENST00000511933 [bp] 852 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-004 [Transcript ID] ENST00000393345 [bp] 847 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-011 [Transcript ID] ENST00000513412 [bp] 650 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PHB-014 [Transcript ID] ENST00000507748 [bp] 582 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: PHB-001 (ENST00000300408)


Input: [Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-013 (ENST00000441549)


Input: [Name] FUS-001 [Transcript ID] ENST00000254108 [bp] 5119 [Protein] 526aa [Translation ID] ENSP00000254108 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10707 [UniProt] P35637 Q6IBQ5 [RefSeq] NM_001170937 NM_004960 NP_001164408 NP_004951 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-008 [Transcript ID] ENST00000380244 [bp] 1818 [Protein] 525aa [Translation ID] ENSP00000369594 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58454 [UniProt] P35637 [RefSeq] NM_001170634 NP_001164105 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-016 [Transcript ID] ENST00000568685 [bp] 1785 [Protein] 527aa [Translation ID] ENSP00000455282 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPE7 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-010 [Transcript ID] ENST00000566605 [bp] 1787 [Protein] 263aa [Translation ID] ENSP00000455073 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNZ4 [RefSeq] - [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-004 [Transcript ID] ENST00000474990 [bp] 827 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-006 [Transcript ID] ENST00000487509 [bp] 4920 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-002 [Transcript ID] ENST00000487045 [bp] 952 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-022 [Transcript ID] ENST00000564766 [bp] 791 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-007 [Transcript ID] ENST00000483853 [bp] 778 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-003 [Transcript ID] ENST00000487974 [bp] 643 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-020 [Transcript ID] ENST00000569760 [bp] 639 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-018 [Transcript ID] ENST00000570090 [bp] 544 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-019 [Transcript ID] ENST00000568901 [bp] 521 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] Slc7a7-005 [Transcript ID] ENSMUST00000197440 [bp] 2278 [Protein] 510aa [Translation ID] ENSMUSP00000143743 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS27087 [UniProt] - [RefSeq] NM_001253679 NM_011405 NP_001240608 NP_035535 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-001 [Transcript ID] ENSMUST00000000984 [bp] 2132 [Protein] 510aa [Translation ID] ENSMUSP00000000984 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS27087 [UniProt] Q9Z1K8 [RefSeq] NM_001253680 NP_001240609 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-002 [Transcript ID] ENSMUST00000195970 [bp] 2057 [Protein] 510aa [Translation ID] ENSMUSP00000143091 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS27087 [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-008 [Transcript ID] ENSMUST00000200545 [bp] 664 [Protein] 186aa [Translation ID] ENSMUSP00000142587 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-006 [Transcript ID] ENSMUST00000195999 [bp] 622 [Protein] 13aa [Translation ID] ENSMUSP00000142826 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-007 [Transcript ID] ENSMUST00000196215 [bp] 461 [Protein] 59aa [Translation ID] ENSMUSP00000142710 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-004 [Transcript ID] ENSMUST00000196966 [bp] 638 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] Slc7a7-003 [Transcript ID] ENSMUST00000197667 [bp] 492 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Mus musculus - Summary - Gene: Slc7a7 (ENSMUSG00000000958)


Input: [Name] GABRA1-001 [Transcript ID] ENST00000428797 [bp] 4273 [Protein] 456aa [Translation ID] ENSP00000393097 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS4357 [UniProt] P14867 [RefSeq] NM_001127643 NP_001121115 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-004 [Transcript ID] ENST00000437025 [bp] 4087 [Protein] 456aa [Translation ID] ENSP00000415441 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS4357 [UniProt] P14867 [RefSeq] NM_001127645 NM_001127648 NP_001121117 NP_001121120 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-005 [Transcript ID] ENST00000393943 [bp] 2119 [Protein] 456aa [Translation ID] ENSP00000377517 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS4357 [UniProt] P14867 [RefSeq] NM_001127644 NP_001121116 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-002 [Transcript ID] ENST00000023897 [bp] 2083 [Protein] 456aa [Translation ID] ENSP00000023897 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS4357 [UniProt] P14867 [RefSeq] NM_000806 NP_000797 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-008 [Transcript ID] ENST00000519621 [bp] 583 [Protein] 123aa [Translation ID] ENSP00000430435 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RK60 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-007 [Transcript ID] ENST00000522651 [bp] 571 [Protein] 85aa [Translation ID] ENSP00000430507 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RJS3 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-006 [Transcript ID] ENST00000521339 [bp] 414 [Protein] 91aa [Translation ID] ENSP00000430895 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RHL6 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] GABRA1-009 [Transcript ID] ENST00000519542 [bp] 572 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Gene tree - Gene: GABRA1 (ENSG00000022355)


Input: [Name] FUS-001 [Transcript ID] ENST00000254108 [bp] 5119 [Protein] 526aa [Translation ID] ENSP00000254108 [CCDS] CCDS10707 [UniProt] P35637 Q6IBQ5 [RefSeq] NM_001170937 NM_004960 NP_001164408 NP_004951 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-008 [Transcript ID] ENST00000380244 [bp] 1818 [Protein] 525aa [Translation ID] ENSP00000369594 [CCDS] CCDS58454 [UniProt] P35637 [RefSeq] NM_001170634 NP_001164105 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-016 [Transcript ID] ENST00000568685 [bp] 1785 [Protein] 527aa [Translation ID] ENSP00000455282 [CCDS] - [UniProt] H3BPE7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-010 [Transcript ID] ENST00000566605 [bp] 1787 [Protein] 263aa [Translation ID] ENSP00000455073 [CCDS] - [UniProt] H3BNZ4 [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]

Output: Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-004 [Transcript ID] ENST00000474990 [bp] 827 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]

Output: Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-006 [Transcript ID] ENST00000487509 [bp] 4920 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-002 [Transcript ID] ENST00000487045 [bp] 952 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-022 [Transcript ID] ENST00000564766 [bp] 791 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-007 [Transcript ID] ENST00000483853 [bp] 778 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-003 [Transcript ID] ENST00000487974 [bp] 643 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-020 [Transcript ID] ENST00000569760 [bp] 639 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-018 [Transcript ID] ENST00000570090 [bp] 544 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] FUS-019 [Transcript ID] ENST00000568901 [bp] 521 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2 [Biotype]

Output: Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron

Ensembl genome browser 81: Homo sapiens - Summary - Gene: FUS (ENSG00000089280)


Input: [Name] TARDBP-001 [Transcript ID] ENST00000240185 [bp] 5367 [Protein] 414aa [Translation ID] ENSP00000240185 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS122 [UniProt] A0A024R4E2 Q13148 [RefSeq] NM_007375 NP_031401 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-003 [Transcript ID] ENST00000315091 [bp] 1835 [Protein] 295aa [Translation ID] ENSP00000313129 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B1AKP7 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-201 [Transcript ID] ENST00000629725 [bp] 1031 [Protein] 298aa [Translation ID] ENSP00000486989 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-012 [Transcript ID] ENST00000621790 [bp] 1008 [Protein] 304aa [Translation ID] ENSP00000482191 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WYY0 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-019 [Transcript ID] ENST00000617172 [bp] 980 [Protein] 212aa [Translation ID] ENSP00000479219 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WV68 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-005 [Transcript ID] ENST00000476201 [bp] 929 [Protein] 276aa [Translation ID] ENSP00000466842 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EN94 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-013 [Transcript ID] ENST00000616545 [bp] 920 [Protein] 301aa [Translation ID] ENSP00000484722 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X260 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-016 [Transcript ID] ENST00000621715 [bp] 816 [Protein] 243aa [Translation ID] ENSP00000480690 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WX29 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-017 [Transcript ID] ENST00000622057 [bp] 706 [Protein] 200aa [Translation ID] ENSP00000481206 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WXQ5 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-004 [Transcript ID] ENST00000473118 [bp] 701 [Protein] 201aa [Translation ID] ENSP00000465240 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EJM5 [RefSeq] - [Flags]

Output: 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-022 [Transcript ID] ENST00000610369 [bp] 563 [Protein] 127aa [Translation ID] ENSP00000482559 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WZC9 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-002 [Transcript ID] ENST00000473869 [bp] 1946 [Protein] 298aa [Translation ID] ENSP00000432132 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] G3V162 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-011 [Transcript ID] ENST00000439080 [bp] 1388 [Protein] 84aa [Translation ID] ENSP00000404666 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A0A0MSV7 [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-006 [Transcript ID] ENST00000472476 [bp] 1001 [Protein] 80aa [Translation ID] ENSP00000465080 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K7EJ99 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-025 [Transcript ID] ENST00000621573 [bp] 992 [Protein] 35aa [Translation ID] ENSP00000477852 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WTG4 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-020 [Transcript ID] ENST00000611963 [bp] 739 [Protein] 175aa [Translation ID] ENSP00000481330 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WXV3 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-021 [Transcript ID] ENST00000620632 [bp] 706 [Protein] 149aa [Translation ID] ENSP00000480771 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WX67 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-008 [Transcript ID] ENST00000496840 [bp] 692 [Protein] 16aa [Translation ID] ENSP00000467020 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K7ENM9 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-018 [Transcript ID] ENST00000619555 [bp] 682 [Protein] 138aa [Translation ID] ENSP00000479978 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WW61 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-024 [Transcript ID] ENST00000620505 [bp] 657 [Protein] 115aa [Translation ID] ENSP00000479758 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WVX6 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-023 [Transcript ID] ENST00000614494 [bp] 515 [Protein] 78aa [Translation ID] ENSP00000482754 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] A0A087WZM1 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-007 [Transcript ID] ENST00000477447 [bp] 409 [Protein] 65aa [Translation ID] ENSP00000465888 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K7EL26 [RefSeq] - [Flags]

Output: 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-026 [Transcript ID] ENST00000611008 [bp] 929 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-009 [Transcript ID] ENST00000480464 [bp] 790 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-014 [Transcript ID] ENST00000613864 [bp] 584 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-028 [Transcript ID] ENST00000617757 [bp] 434 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-027 [Transcript ID] ENST00000613177 [bp] 379 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-015 [Transcript ID] ENST00000618606 [bp] 584 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]

Output: Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] EPHA5-202 [Transcript ID] ENST00000622150 [bp] 8421 [Protein] 1038aa [Translation ID] ENSP00000480763 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75133 [UniProt] B7ZKJ3 [RefSeq] NM_001281765 NP_001268694 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] EPHA5-201 [Transcript ID] ENST00000613740 [bp] 8355 [Protein] 1016aa [Translation ID] ENSP00000478537 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75131 [UniProt] B7ZKW7 [RefSeq] NM_001281766 NP_001268695 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] EPHA5-001 [Transcript ID] ENST00000273854 [bp] 8266 [Protein] 1037aa [Translation ID] ENSP00000273854 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3513 [UniProt] P54756 [RefSeq] NM_004439 NP_004430 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] EPHA5-004 [Transcript ID] ENST00000511294 [bp] 5176 [Protein] 1004aa [Translation ID] ENSP00000427638 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75132 [UniProt] F8VP57 [RefSeq] NM_001281767 NP_001268696 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] EPHA5-002 [Transcript ID] ENST00000354839 [bp] 3427 [Protein] 1015aa [Translation ID] ENSP00000346899 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS3514 [UniProt] P54756 [RefSeq] NM_182472 NP_872272 [Flags]

Output: Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] EPHA5-003 [Transcript ID] ENST00000432638 [bp] 3662 [Protein] 874aa [Translation ID] ENSP00000389208 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F8W9W0 [RefSeq] - [Flags]

Output: Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: EPHA5-001 (ENST00000273854)


Input: [Name] TARDBP-001 [Transcript ID] ENST00000240185 [bp] 5367 [Protein] 414aa [Translation ID] ENSP00000240185 [CCDS] CCDS122 [UniProt] A0A024R4E2 Q13148 [RefSeq] NM_007375 NP_031401 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-003 [Transcript ID] ENST00000315091 [bp] 1835 [Protein] 295aa [Translation ID] ENSP00000313129 [CCDS] - [UniProt] B1AKP7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-201 [Transcript ID] ENST00000629725 [bp] 1031 [Protein] 298aa [Translation ID] ENSP00000486989 [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-012 [Transcript ID] ENST00000621790 [bp] 1008 [Protein] 304aa [Translation ID] ENSP00000482191 [CCDS] - [UniProt] A0A087WYY0 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)


Input: [Name] TARDBP-019 [Transcript ID] ENST00000617172 [bp] 980 [Protein] 212aa [Translation ID] ENSP00000479219 [CCDS] - [UniProt] A0A087WV68 [RefSeq] - [Flags] 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]

Output: Genes and/or transcript that contains an open reading frame (ORF).Protein coding

Ensembl genome browser 81: Homo sapiens - Summary - Transcript: TARDBP-007 (ENST00000477447)