MeriDK commited on
Commit
ece7187
·
1 Parent(s): 4f8ca91

Updated loading logic

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Files changed (1) hide show
  1. AstroM3Dataset.py +4 -12
AstroM3Dataset.py CHANGED
@@ -5,10 +5,8 @@ import pandas as pd
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  import numpy as np
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  import json
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  from astropy.io import fits
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- from tqdm import tqdm
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  from utils.parallelzipfile import ParallelZipFile as ZipFile
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- from datasets.utils.tqdm import enable_progress_bars, disable_progress_bars
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  _DESCRIPTION = (
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  "AstroM3 is a time-series astronomy dataset containing photometry, spectra, "
@@ -39,8 +37,6 @@ _CITATION = """
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  class AstroM3Dataset(datasets.GeneratorBasedBuilder):
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  """Hugging Face dataset for AstroM3 with configurable subsets and seeds."""
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- # HF_DATASETS_DISABLE_PROGRESS_BARS = True
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-
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  DEFAULT_CONFIG_NAME = "full_42"
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  BUILDER_CONFIGS = [
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  datasets.BuilderConfig(name=f"{sub}_{seed}", version=_VERSION, data_dir=None)
@@ -118,25 +114,21 @@ class AstroM3Dataset(datasets.GeneratorBasedBuilder):
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  "info": f"{_URL}/splits/{sub}/{seed}/info.json",
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  }
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  extracted_path = dl_manager.download(urls)
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- # print("Downloaded train.csv val.csv test.csv info.json")
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- # Load all spectra files
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- spectra = {}
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  df1 = pd.read_csv(extracted_path["train"])
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  df2 = pd.read_csv(extracted_path["val"])
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  df3 = pd.read_csv(extracted_path["test"])
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  df_combined = pd.concat([df1, df2, df3], ignore_index=True)
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  for _, row in df_combined.iterrows():
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- spectra_url = f"{_URL}/spectra/{row['target']}/{row['spec_filename']}"
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- spectra[row["spec_filename"]] = dl_manager.download(spectra_url)
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-
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- # print("Downloaded spectra files")
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  # Load photometry and init reader
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  photometry_path = dl_manager.download(f"{_URL}/photometry.zip")
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  self.reader_v = ZipFile(photometry_path)
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- # print("Downloaded photometry")
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  return [
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  datasets.SplitGenerator(
 
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  import numpy as np
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  import json
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  from astropy.io import fits
 
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  from utils.parallelzipfile import ParallelZipFile as ZipFile
 
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  _DESCRIPTION = (
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  "AstroM3 is a time-series astronomy dataset containing photometry, spectra, "
 
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  class AstroM3Dataset(datasets.GeneratorBasedBuilder):
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  """Hugging Face dataset for AstroM3 with configurable subsets and seeds."""
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  DEFAULT_CONFIG_NAME = "full_42"
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  BUILDER_CONFIGS = [
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  datasets.BuilderConfig(name=f"{sub}_{seed}", version=_VERSION, data_dir=None)
 
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  "info": f"{_URL}/splits/{sub}/{seed}/info.json",
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  }
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  extracted_path = dl_manager.download(urls)
 
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  df1 = pd.read_csv(extracted_path["train"])
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  df2 = pd.read_csv(extracted_path["val"])
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  df3 = pd.read_csv(extracted_path["test"])
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  df_combined = pd.concat([df1, df2, df3], ignore_index=True)
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+ # Load all spectra files
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+ spectra_urls = {}
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  for _, row in df_combined.iterrows():
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+ spectra_urls[row["spec_filename"]] = f"{_URL}/spectra/{row['target']}/{row['spec_filename']}"
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+ spectra = dl_manager.download(spectra_urls)
 
 
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  # Load photometry and init reader
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  photometry_path = dl_manager.download(f"{_URL}/photometry.zip")
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  self.reader_v = ZipFile(photometry_path)
 
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  return [
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  datasets.SplitGenerator(