15 May 2009, at 10:20a.m.
US - New research by Raviv and Kleven at the University of Georgia describes the development of advanced real-time PCRs for four avian mycoplasmas.
Mycoplasmas are very small prokaryotic organisms lacking a cell wall and bounded by a plasma membrane. Four avian mycoplasmas are commonly recognised as poultry pathogens: Mycoplasma gallisepticum (MG), Mycoplasma synoviae (MS), Mycoplasma meleagridis (MM) and Mycoplasma iowae (MI). The four pathogenic avian mycoplasmas are important poultry pathogens that have significant implications on production and trading of poultry products.
molecular detection of the organism's nucleic acid by polymerase chain reaction (PCR).
Culture is the 'gold standard' for direct detection of the organism but pathogenic avian mycoplasmas are slow growing, fastidious organisms, and their isolation might be impaired by overgrowth of saprophytic, non-pathogenic mycoplasmas and contaminant bacteria and fungi. Serologic tests have long been the basis for avian mycoplasma surveillance, but are of lesser value for the detection of early infections.
Polymerase Chain Reaction (PCR) has gained a pivotal role in the diagnosis of avian mycoplasma infection. The main advantages of PCR in avian mycoplasma diagnostics are the high specificity and sensitivity of the method along with its rapid turnover, ease and relatively inexpensive application, and the detection of the organism without the necessity to culture it. Several PCR assays for the four pathogenic avian mycoplasmas have been proposed since the early 1990s. The earlier PCR assays targeted the 16S rRNA gene, a highly conserved genomic region among bacteria that might cross react with other mollicutes and prokaryotes; an example for such inter-species cross reaction with avian mycoplasmas was observed between MG and Mycoplasma imitans. Recent PCR assays successfully targeted more species-specific genes but these targets appear to contain high levels of intra-specific genetic polymorphism that might result in reduced sensitivity of these assays to some of the members of a given mycoplasma species.
In recent years, real-time PCR technology has revolutionised the way laboratories diagnose infectious diseases. The combination of excellent sensitivity and specificity, ease of performance, speed, high throughput capabilities, inherent quantitative nature, and cost efficiency has made real-time PCR technology an appealing alternative to conventional PCR. So far, only a limited number of diagnostic real-time PCR assays were proposed for avian mycoplasma diagnosis.
The researchers' objectives were to develop a complete set of diagnostic real-time PCR assays for the four pathogenic avian mycoplasmas and to propose the utilisation of real-time and high throughput technologies in avian mycoplasma diagnostics. They also aimed to optimise the species specificity and the intra-specific monomorphism of the genomic regions that were targeted by their assays.
Four real-time TaqMan PCR assays for the detection of the four pathogenic avian mycoplasmas were developed. The selected genomic targets of the developed assays were species-specific and intra-specifically conserved and included the 16S-23S intergenic spacer region of MS and MM, the upstream region to the 16S rDNA of MI, and highly conserved foci of the mgc2 gene of MG. The four assays were demonstrated highly specific and sensitive to their target avian mycoplasma, with detection limits of one copy per reaction mix for the MG assay and ten copies per reaction mix for the MS, MM and MI assays. The procedures are very rapid, have high throughput capability, and are more sensitive than conventional PCR.
The Georgia scientists propose the addition of the real-time TaqMan PCR assays in the routine diagnosis of avian mycoplasmosis because the inclusion of these assays in avian mycoplasma diagnostics will contribute to the accuracy, efficiency and feasibility of the diagnosis of these pathogens.
Project F018. The development of advanced diagnostic real-time TaqMan PCRs for the four pathogenic avian mycoplasmas. By Raviv Z. and S.H. Kleven, University of Georgia, US. Funded by US Poultry & Egg Association.