Prior to attempting the CHROOT I had Squid running fine, however there appears to be some issues now that I'm running under chroot.
2015/05/01 20:33:21| Adaptation support is off.
2015/05/02 00:33:22| Finished. Wrote 0 entries.
2015/05/02 00:33:22| Took 0.00 seconds ( 0.00 entries/sec).
FATAL: I don't handle this error well!
Squid Cache (Version 3.3.9): Terminated abnormally.
Not knowing much about the inter workings of squid, and what not, but I'm guessing that Number 3 will be resolved when Number 2 is resolved. And Number 1 and 2 are closely related.
The issue is I'm at a stand still have to proceed with fixing Number 1 and 2.
So i believe I have it in the right place. And the file permissions appear to be the same within the CHROOT as they are in the normal directories.