BUG: pandas.DataFrame.update with subset of MultiIndex fails without exception
- [Yes] I have checked that this issue has not already been reported.

- [Yes] I have confirmed this bug exists on the latest version of pandas.

- [No] (optional) I have confirmed this bug exists on the master branch of pandas.

---
Reproducible example:

```python
import pandas as pd
import numpy as np
# Prepare the data. We want to update df with dd.
df = pd.DataFrame(np.random.rand(10, 2), columns=['col1', 'col2'])
df['index_1'] = ['a', 'a', 'a', 'b', 'b', 'b', 'c', 'c', 'c', 'c']
df['index_2'] = ['a', 'b', 'c', 'a', 'b', 'c', 'a', 'b', 'c', 'd']
df.set_index(['index_1', 'index_2'], inplace=True)
df.sort_index(inplace=True)
df['d'] = 0.0
dd = df.reset_index(drop=False).loc[:, ['index_1', 'd']].drop_duplicates()
dd['d'] = np.arange(3)
dd.set_index(['index_1'], inplace=True)
df.update(dd)
print(df)
```

#### Problem description
Updating a dataframe with a subset of a multiindex doesn't work as expected (no update is done), but also no exceptions are thrown to alert the user that the update failed.  [The documentation of pandas.DataFrame.update](https://pandas.pydata.org/pandas-docs/version/0.22.0/generated/pandas.DataFrame.update.html) isn't specific about this behavior either. 

Overall, ***I think*** there are three issues here:

1. Update fails when proper index alignment would work
2. An exception should be thrown to alert the user indices can not be aligned
3. The documentation should be more specific about this.

#### Expected Output

The reproduction code outputs
outputs 
```
                     col1      col2    d
index_1 index_2                         
a       a        0.795218  0.212346  0.0
        b        0.465080  0.577137  0.0
        c        0.400045  0.659623  0.0
b       a        0.243119  0.338171  0.0
        b        0.204571  0.432486  0.0
        c        0.981068  0.169303  0.0
c       a        0.097898  0.944876  0.0
        b        0.864037  0.664877  0.0
        c        0.795955  0.558834  0.0
        d        0.614118  0.556195  0.0
```

While the expected output is
```
                     col1      col2  d
index_1 index_2                       
a       a        0.795218  0.212346  0
        b        0.465080  0.577137  0
        c        0.400045  0.659623  0
b       a        0.243119  0.338171  1
        b        0.204571  0.432486  1
        c        0.981068  0.169303  1
c       a        0.097898  0.944876  2
        b        0.864037  0.664877  2
        c        0.795955  0.558834  2
        d        0.614118  0.556195  2
```
That is, I would expect update to behave as if we had done
```python
df['d'] = dd.reindex(df.index.get_level_values(0))['d'].values
```
With the caveat that col1, col2 are random and just there as fillers. 

#### Output of ``pd.show_versions()``

<details>

INSTALLED VERSIONS
------------------
commit           : 9d598a5e1eee26df95b3910e3f2934890d062caa
python           : 3.8.7.final.0
python-bits      : 64
OS               : Linux
OS-release       : 5.5.17-200.fc31.x86_64
Version          : #1 SMP Mon Apr 13 15:29:42 UTC 2020
machine          : x86_64
processor        : x86_64
byteorder        : little
LC_ALL           : None
LANG             : en_US.UTF-8
LOCALE           : en_US.UTF-8

pandas           : 1.2.1
numpy            : 1.19.4
pytz             : 2020.4
dateutil         : 2.8.1
pip              : 20.3.3
setuptools       : 50.3.2
Cython           : None
pytest           : 6.1.2
hypothesis       : None
sphinx           : None
blosc            : None
feather          : None
xlsxwriter       : None
lxml.etree       : None
html5lib         : None
pymysql          : None
psycopg2         : None
jinja2           : 2.11.2
IPython          : 8.0.0.dev
pandas_datareader: None
bs4              : None
bottleneck       : 1.3.2
fsspec           : 0.8.5
fastparquet      : None
gcsfs            : None
matplotlib       : 3.3.3
numexpr          : 2.7.1
odfpy            : None
openpyxl         : None
pandas_gbq       : None
pyarrow          : 2.0.0
pyxlsb           : None
s3fs             : None
scipy            : 1.5.4
sqlalchemy       : None
tables           : 3.6.1
tabulate         : None
xarray           : None
xlrd             : 1.2.0
xlwt             : 1.3.0
numba            : 0.51.2

</details>

#### Something extra

The issue of update failing for the case of 2 indices updated with 1 could be easily fixed by using the _level_ argument of reindex, as used in by pandas.DataFrame.reindex_like, which is used by update. However, this wouldn't work if we were updating 3 indices from 2, because level doesn't accept a list. 

