BUG: Fix reindexing with multi-indexed DataFrames
- [x] closes https://github.com/pandas-dev/pandas/issues/29896
- [x] tests added / passed
- [x] passes `black pandas`
- [x] passes `git diff upstream/master -u -- "*.py" | flake8 --diff`
- [x] whatsnew entry

Addresses an issue which appears to have existed since 0.23.0 where bugs in the `get_indexer()` method for the `MultiIndex` class cause incorrect reindexing behavior for multi-indexed DataFrames.

motivating, example, from (the issue)
```python
>>> 
>>> df = pd.DataFrame({
...     'a': [0, 0, 0, 0],
...     'b': [0, 2, 3, 4],
...     'c': ['A', 'B', 'C', 'D']
... }).set_index(['a', 'b'])
>>> 
>>> df
     c
a b   
0 0  A
  2  B
  3  C
  4  D
>>> df.index
MultiIndex([(0, 0),
            (0, 2),
            (0, 3),
            (0, 4)],
           names=['a', 'b'])
>>> mi_2 = pd.MultiIndex.from_product([[0], [-1, 0, 1, 3, 4, 5]])
>>> mi_2
MultiIndex([(0, -1),
            (0,  0),
            (0,  1),
            (0,  3),
            (0,  4),
            (0,  5)],
           )
```

as expected, without a `method` value:
```python
>>> df.reindex(mi_2)
        c
0 -1  NaN
   0    A
   1  NaN
   3    C
   4    D
   5  NaN
```

using `method="backfill"`, it is:
```python
>>> 
>>> df.reindex(mi_2, method="backfill")
      c
0 -1  A
   0  A
   1  D
   3  A
   4  A
   5  C
>>>
```
but should (IMHO) be:
```python
>>> df.reindex(mi_2, method="backfill")
        c
0 -1    A
   0    A
   1    B
   3    C
   4    D
   5  NaN
>>>
```

similarly, using `method="pad"`, it is:
```python
>>> df.reindex(mi_2, method="pad")
        c
0 -1  NaN
   0  NaN
   1    D
   3  NaN
   4    A
   5    C
```
but should (IMHO) be:
```python
>>> df.reindex(mi_2, method="pad")
        c
0 -1  NaN
   0    A
   1    A
   3    C
   4    D
   5    D
```