 In "Two Bodies in the Lab" Booth went against protocol and allowed Hodgins to go with him to rescue Dr. Brennan - albeit because Hodgins was the only person available to drive him to help Brennan - and their animosity subsides from then on.Despite their opposing views, they are on friendly terms, with Hodgins expressing genuine regret when a current investigation exposed a military cover-up as he recognized what their discoveries meant for Booth.Hodgins also asked for Booth's advice when he was planning to propose to Angela.