 Naybet scored a career best four goals in the 1997–98 season, but the Galicians could only finish in 12th position.He was still an undisputed starter in 1999–2000 – often partnering Argentine Gabriel Schürrer – as the club conquered the first league in its history.Naybet started in all his 13 UEFA Champions League appearances in the 2003–04 campaign, helping "Dépor" to the semi-finals of the competition.