the copper site of each copper protein. The protein azurin has a trigonal bipyramidal geometry with elongated axial glycine and methoinione sulfur ligands. Plastocyanins have an additional methionine sulfur ligand on the axial position. The main difference of each copper protein is that each protein has different number and species of ligand coordinated to the copper center. Electronic structure of the blue copper protein type I copper complexes The strong bond between the copper ion and the cysteine sulfur allows for the non-bonded electron on the cysteine sulfur to be present on both the low/high spin state copper ion, dx2-dy2 orbital and the p-orbital of the cysteine sulfur. Most copper (II) complexes will exhibit the Jahn-Teller effect when the complex forms a tetragonal distortion of an octahedral complex geometry. With blue copper proteins, a distorted tetrahedral complex will be formed due to the strong equatorial cysteine ligand and the weak axial methionine ligand. The two neutral histidine ligands are positioned by the protein ligand so the geometry is distorted tetrahedral. This will cause them not to be able to coordinate perfectly as tetrahedral or a square planar. Spectral changes with temperature Lowering the temperature may change the transitions. The intense absorbance at about 16000 cm−1 was characterized the absorptions feature of blue copper. There was a second lower energy feature band with moderate absorption intensity. Polarized signal-crystal absorption data on plastocyanin showed that both bands have the same polarization ratio that associated with Cu(II)-S(Cys) bond. This is explained that the normal cupric complex has high energy intense sigma and low energy weak π bonds. However, in the blue copper protein case have low energy intense sigma and high energy weak π bonds because CT intensity reflects overlap of the donor and acceptor orbitals in the CT process. This required that the 3d(x2-y2 ) orbital of the blue copper site be oriented such that its lobes bisect the Cu-S(Cys) bond giving dominant π overlap with sulfur directly. Finally, the nature of the ground state wave function of the blue copper protein is rich in electron absorption spectrum. Inner and outer sphere metal coordination The cysteine sulfur copper (II) ion bonds range from 2.6 to 3.2 Å. With the reduced form, CuI, protein structures are still formed with elongated bonds by 0.1 Å or less. with the oxidized and reduced protein structures, they are superimposable. With amicyanin, there is an exception due