Nod factors (nodulation factors or NF), are signaling molecules produced by soil bacteria known as rhizobia in response to flavonoid exudation from plants under nitrogen limited conditions. Nod factors initiate the establishment of a symbiotic relationship between legumes and rhizobia by inducing nodulation. Nod factors produce the differentiation of plant tissue in root hairs into nodules where the bacteria reside and are able to fix nitrogen from the atmosphere for the plant in exchange for photosynthates and the appropriate environment for nitrogen fixation. One of the most important features provided by the plant in this symbiosis is the production of leghemoglobin, which maintains the oxygen concentration low and prevents the inhibition of nitrogenase activity. Chemical Structure Nod factors structurally are lipochitooligosaccharides (LCOs) that consist of an N-acetyl-D-glucosamine chain linked through β-1,4 linkage with a fatty acid of variable identity attached to a non reducing nitrogen in the backbone with various functional group substitutions at the terminal or non-terminal residues. Nod factors are produced in complex mixtures differing in the following characteristics: Length of the chain can vary from three to six units of N-acetyl-D-glucosamine with the exception of M. loti which can produce Nod factors with two unit only. Presence or absence of strain-specific substitutions along the chain Identity of the fatty acid component Presence or absence of unsaturated fatty acids Nod gene expression is induced by the presence of certain flavonoids in the soil, which are secreted by the plant and act as an attractant to bacteria and induce Nod factor production. Flavonoids activate NodD, a LysR family transcription factor, which binds to the nod box and initiates the transcription of the nod genes which encode the proteins necessary for the production of a wide range of LCOs. Function Nod factors are potentially recognized by plant receptors made of two histidine kinases with extracellular LysM domain, which have been identified in L. japonicus, soybean, and M. truncatula . Binding of Nod factors to these receptors depolarizes the plasma membrane of root hairs via an influx of Ca+2 which induce the expression of early nodulin (ENOD) genes and swelling of the root hairs. In M. truncatula, the signal transduction initiates by the activation of dmi1, dmi2, and dmi3 which lead to the deformation of root hairs, early nodulin expression, cortical cell division and bacterial infection. Additionally, nsp and hcl genes are recruited later and aid in the process of early