The CWL standards project is a FAIR-aware initiative for describing and sharing workflows in a WfMS-independent way. It uses standards and machine-readable formats for workflow definition. With CWL, users can easily share and reuse the workflows across different platforms and domains. Some CWL-aware workflow executors (like the CWL reference implementation, cwltool) also consistently collect relational data or provenance between different research artefacts of the workflows. The flow of activities between different modules during workflow execution and the associated data and metadata can be packaged as one entity to facilitate reusability. The Research Object-Crate community initiated the efforts in the Workflow RO-Crate profile, which captures the metadata associated with the workflow in a JSON-LD format. RO-Crate is the fundamental unit of uploading and downloading workflows to and from the WorkflowHub. These efforts are the basis for more domain-specific tasks, such as the provenance collection in our use case, metabolomics data, which requires domain-specific standards and ontologies.