For the majority of the analysis done in this paper we explore the 1-backbone/1-side chain (1b1s) model for a variety of hypotheses. Figure depicts a short segment of a 1b1s model with relevant topology labeled. We label the torsions, bond angles and bond lengths consisting of all back bone atoms as φ B , θ B and d BB , respectively. Torsions, bond angles and bond lengths including side chain beads are labeled as φ S , θ S and d BS , respectively.