Since the input needed to run this tool is not exclusive to polymers, it can be applied to any other type of system to measure molecular clustering. In this case, this is the result of the SCP being applied on CG transmembrane peptides inserted into a membrane. This is a top-view of the peptides-membrane system. Proteins colored in the same way belong to the same cluster. Blue cluster contains two peptides, the pink cluster has 6 peptides and the orange cluster has 8 peptides. The lipids membrane is colored in silver. Representation is not to scale.