int function ( int arg0 ) { if ( arg0 == GenomicIndexUtil . LEVEL_STARTS . length - 1 ) return GenomicIndexUtil . MAX_BINS - GenomicIndexUtil . LEVEL_STARTS [ arg0 ] - 1 ; else return GenomicIndexUtil . LEVEL_STARTS [ arg0 + 1 ] - GenomicIndexUtil . LEVEL_STARTS [ arg0 ] ; }
gets the size number of bins in a given level of a bam index . concode_field_sep int SRA_BIN_SIZE concode_elem_sep int MAX_FRAGMENT_OVERLAP concode_elem_sep int SRA_CHUNK_SIZE concode_elem_sep int SRA_BIN_INDEX_OFFSET concode_elem_sep SAMFileHeader header concode_elem_sep SRAIterator.RecordRangeInfo recordRangeInfo concode_field_sep int getFirstLocusInBin concode_elem_sep BAMFileSpan getSpanOverlapping concode_elem_sep BAMFileSpan getSpanOverlapping concode_elem_sep int getLastLocusInBin concode_elem_sep long getStartOfLastLinearBin concode_elem_sep List<Chunk> getBinChunks concode_elem_sep BinList getBinsOverlapping concode_elem_sep BAMIndexMetaData getMetaData concode_elem_sep void close concode_elem_sep int getLevelForBin