List < SecStrucState > function ( String arg0 , Structure arg1 , boolean arg2 ) { Reader loc0 = new StringReader ( arg0 ) ; BufferedReader loc1 = new BufferedReader ( loc0 ) ; return generalParse ( loc1 , arg1 , arg2 ) ; }
parse a dssp format string and return the secondary structure annotation as a list of secstrucstate objects . concode_field_sep Logger logger concode_field_sep List<SecStrucState> fetch concode_elem_sep List<SecStrucState> parseFile concode_elem_sep List<SecStrucState> generalParse