Iterator < Atom > function ( ) { return new AtomIterator ( this ) ; }
return an atomiterator . concode_field_sep Chain parent concode_elem_sep long serialVersionUID concode_elem_sep boolean pdb_flag concode_elem_sep Map<String,Atom> atomNameLookup concode_elem_sep String pdb_name concode_elem_sep ChemComp chemComp concode_elem_sep List<Atom> atoms concode_elem_sep Logger logger concode_elem_sep List<Group> altLocs concode_elem_sep ResidueNumber residueNumber concode_elem_sep PerformanceBehavior performanceBehavior concode_elem_sep long id concode_elem_sep boolean isHetAtomInFile concode_elem_sep GroupType type concode_elem_sep Map<String,Object> properties concode_field_sep ChemComp getChemComp concode_elem_sep Group getAltLocGroup concode_elem_sep boolean isPolymeric concode_elem_sep void setProperties concode_elem_sep boolean hasAtom concode_elem_sep long getId concode_elem_sep Chain getChain concode_elem_sep void setResidueNumber concode_elem_sep void setResidueNumber concode_elem_sep boolean hasAltLoc concode_elem_sep String getChainId concode_elem_sep boolean hasAminoAtoms concode_elem_sep void addAtom concode_elem_sep void setChemComp concode_elem_sep void setId concode_elem_sep boolean isHetAtomInFile concode_elem_sep ResidueNumber getResidueNumber concode_elem_sep void setHetAtomInFile concode_elem_sep List<Group> getAltLocs concode_elem_sep void clearAtoms concode_elem_sep void setPDBName concode_elem_sep Object getProperty concode_elem_sep void trimToSize concode_elem_sep List<Atom> getAtoms concode_elem_sep Map<String,Object> getProperties concode_elem_sep boolean has3D concode_elem_sep String toSDF concode_elem_sep boolean isWater concode_elem_sep void setChain concode_elem_sep String getPDBName concode_elem_sep int size concode_elem_sep GroupType getType concode_elem_sep void setProperty concode_elem_sep Object clone concode_elem_sep void setAtoms concode_elem_sep Atom getAtom concode_elem_sep Atom getAtom concode_elem_sep String toString concode_elem_sep boolean isAminoAcid concode_elem_sep boolean isNucleotide concode_elem_sep void setPDBFlag concode_elem_sep void addAltLoc