--- library_name: transformers tags: - Computational Biology - Bioinformatics license: apache-2.0 --- # CodonTransformer CodonTransformer is a state-of-the-art model designed to predict optimized DNA sequences for given protein sequences and organisms. It achieves state-of-the-art performance compared to existing models in the field. More information will be provided soon. https://github.com/Adibvafa/CodonTransformer ## How to Get Started with the Model Use the code below to get started with CodonTransformer: ```python # Load model and tokenizer from transformers import AutoTokenizer, BigBirdForMaskedLM tokenizer = AutoTokenizer.from_pretrained("adibvafa/CodonTransformer") model = BigBirdForMaskedLM.from_pretrained("adibvafa/CodonTransformer") ``` Sample demo is shown at https://github.com/Adibvafa/CodonTransformer/blob/main/CodonTransformerDemo.ipynb