# segmentation-model-v3.1.3_junctions

### Performance Metrics

| Class    |   Precision |   Precision_std |   Recall |   Recall_std |   Mean_IoU |   Mean_IoU_std |
|:---------|------------:|----------------:|---------:|-------------:|-----------:|---------------:|
| Junction |       60.13 |           23.39 |    50.11 |        29.02 |       0.29 |           0.15 |
| process  |       89.27 |            6.16 |    90.04 |         3.59 |       0.58 |           0.08 |
| soma     |       86.59 |           30.33 |    75.56 |        32.97 |       0.83 |           0.23 |
| spine    |       35.72 |           15    |    29.07 |        11.24 |       0.21 |           0.19 |


### Performance Metrics

| Bio object                          |               gt |               pr | pr/gt   |
|:------------------------------------|-----------------:|-----------------:|:--------|
| Total_area_of_neuronal_process_um^2 |      1.03571e+06 |      1.43434e+06 | 138.49% |
| Total_Length_of_neuronal_process_um |  81753.7         |  80533.3         | 98.51%  |
| Total_Area_of_soma_um^2             | 170835           | 140050           | 81.98%  |
| junctions_count                     |    521           |    380           | 72.94%  |
| Number_of_soma_count                |     50           |     34           | 68.00%  |
| Number_of_spine_count               |    783           |    348           | 44.44%  |
| Total_area_of_spine_um^2            |  41147           |  14832           | 36.05%  |


### Plots

![boxplot_soma.png](./plots/boxplot_soma.png)
![boxplot_spine.png](./plots/boxplot_spine.png)
![boxplot_Junction.png](./plots/boxplot_Junction.png)
![boxplot_process.png](./plots/boxplot_process.png)