# segmentation-model-v3.1.3_junctions

### Performance Metrics

| Class    |   Precision |   Precision_std |   Recall |   Recall_std |   Mean_IoU |   Mean_IoU_std |
|:---------|------------:|----------------:|---------:|-------------:|-----------:|---------------:|
| Junction |       58.06 |           22.42 |    63.56 |        22.77 |      38.94 |           8.03 |
| process  |       89.43 |            6.1  |    89.82 |         3.66 |      58    |           7.65 |
| soma     |       86.59 |           30.33 |    75.56 |        32.97 |      82.81 |          23.2  |
| spine    |       35.83 |           15.01 |    29.07 |        11.24 |      37.72 |           6.19 |


### Performance Metrics

| Bio object                          |               gt |               pr | pr/gt   |
|:------------------------------------|-----------------:|-----------------:|:--------|
| Total_area_of_neuronal_process_um^2 |      1.03571e+06 |      1.41578e+06 | 136.70% |
| junctions_count                     |    521           |    580           | 111.32% |
| Total_Length_of_neuronal_process_um |  81753.7         |  81021.4         | 99.10%  |
| Total_Area_of_soma_um^2             | 170835           | 140050           | 81.98%  |
| Number_of_soma_count                |     50           |     34           | 68.00%  |
| Number_of_spine_count               |    783           |    347           | 44.32%  |
| Total_area_of_spine_um^2            |  41147           |  14780           | 35.92%  |


### Plots

![boxplot_soma.png](./plots/boxplot_soma.png)
![boxplot_spine.png](./plots/boxplot_spine.png)
![boxplot_Junction.png](./plots/boxplot_Junction.png)
![boxplot_process.png](./plots/boxplot_process.png)