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""" Build swig and f2py sources. |
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""" |
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import os |
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import re |
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import sys |
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import shlex |
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import copy |
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from distutils.command import build_ext |
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from distutils.dep_util import newer_group, newer |
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from distutils.util import get_platform |
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from distutils.errors import DistutilsError, DistutilsSetupError |
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from numpy.distutils import log |
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from numpy.distutils.misc_util import ( |
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fortran_ext_match, appendpath, is_string, is_sequence, get_cmd |
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) |
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from numpy.distutils.from_template import process_file as process_f_file |
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from numpy.distutils.conv_template import process_file as process_c_file |
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def subst_vars(target, source, d): |
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"""Substitute any occurrence of @foo@ by d['foo'] from source file into |
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target.""" |
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var = re.compile('@([a-zA-Z_]+)@') |
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with open(source, 'r') as fs: |
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with open(target, 'w') as ft: |
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for l in fs: |
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m = var.search(l) |
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if m: |
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ft.write(l.replace('@%s@' % m.group(1), d[m.group(1)])) |
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else: |
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ft.write(l) |
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class build_src(build_ext.build_ext): |
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description = "build sources from SWIG, F2PY files or a function" |
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user_options = [ |
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('build-src=', 'd', "directory to \"build\" sources to"), |
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('f2py-opts=', None, "list of f2py command line options"), |
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('swig=', None, "path to the SWIG executable"), |
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('swig-opts=', None, "list of SWIG command line options"), |
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('swig-cpp', None, "make SWIG create C++ files (default is autodetected from sources)"), |
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('f2pyflags=', None, "additional flags to f2py (use --f2py-opts= instead)"), |
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('swigflags=', None, "additional flags to swig (use --swig-opts= instead)"), |
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('force', 'f', "forcibly build everything (ignore file timestamps)"), |
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('inplace', 'i', |
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"ignore build-lib and put compiled extensions into the source " + |
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"directory alongside your pure Python modules"), |
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('verbose-cfg', None, |
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"change logging level from WARN to INFO which will show all " + |
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"compiler output") |
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] |
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boolean_options = ['force', 'inplace', 'verbose-cfg'] |
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help_options = [] |
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def initialize_options(self): |
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self.extensions = None |
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self.package = None |
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self.py_modules = None |
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self.py_modules_dict = None |
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self.build_src = None |
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self.build_lib = None |
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self.build_base = None |
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self.force = None |
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self.inplace = None |
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self.package_dir = None |
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self.f2pyflags = None |
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self.f2py_opts = None |
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self.swigflags = None |
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self.swig_opts = None |
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self.swig_cpp = None |
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self.swig = None |
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self.verbose_cfg = None |
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def finalize_options(self): |
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self.set_undefined_options('build', |
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('build_base', 'build_base'), |
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('build_lib', 'build_lib'), |
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('force', 'force')) |
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if self.package is None: |
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self.package = self.distribution.ext_package |
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self.extensions = self.distribution.ext_modules |
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self.libraries = self.distribution.libraries or [] |
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self.py_modules = self.distribution.py_modules or [] |
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self.data_files = self.distribution.data_files or [] |
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if self.build_src is None: |
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plat_specifier = ".{}-{}.{}".format(get_platform(), *sys.version_info[:2]) |
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self.build_src = os.path.join(self.build_base, 'src'+plat_specifier) |
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self.py_modules_dict = {} |
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if self.f2pyflags: |
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if self.f2py_opts: |
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log.warn('ignoring --f2pyflags as --f2py-opts already used') |
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else: |
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self.f2py_opts = self.f2pyflags |
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self.f2pyflags = None |
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if self.f2py_opts is None: |
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self.f2py_opts = [] |
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else: |
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self.f2py_opts = shlex.split(self.f2py_opts) |
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if self.swigflags: |
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if self.swig_opts: |
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log.warn('ignoring --swigflags as --swig-opts already used') |
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else: |
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self.swig_opts = self.swigflags |
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self.swigflags = None |
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if self.swig_opts is None: |
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self.swig_opts = [] |
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else: |
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self.swig_opts = shlex.split(self.swig_opts) |
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build_ext = self.get_finalized_command('build_ext') |
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if self.inplace is None: |
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self.inplace = build_ext.inplace |
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if self.swig_cpp is None: |
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self.swig_cpp = build_ext.swig_cpp |
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for c in ['swig', 'swig_opt']: |
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o = '--'+c.replace('_', '-') |
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v = getattr(build_ext, c, None) |
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if v: |
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if getattr(self, c): |
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log.warn('both build_src and build_ext define %s option' % (o)) |
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else: |
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log.info('using "%s=%s" option from build_ext command' % (o, v)) |
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setattr(self, c, v) |
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def run(self): |
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log.info("build_src") |
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if not (self.extensions or self.libraries): |
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return |
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self.build_sources() |
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def build_sources(self): |
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if self.inplace: |
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self.get_package_dir = \ |
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self.get_finalized_command('build_py').get_package_dir |
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self.build_py_modules_sources() |
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for libname_info in self.libraries: |
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self.build_library_sources(*libname_info) |
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if self.extensions: |
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self.check_extensions_list(self.extensions) |
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for ext in self.extensions: |
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self.build_extension_sources(ext) |
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self.build_data_files_sources() |
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self.build_npy_pkg_config() |
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def build_data_files_sources(self): |
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if not self.data_files: |
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return |
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log.info('building data_files sources') |
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from numpy.distutils.misc_util import get_data_files |
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new_data_files = [] |
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for data in self.data_files: |
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if isinstance(data, str): |
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new_data_files.append(data) |
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elif isinstance(data, tuple): |
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d, files = data |
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if self.inplace: |
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build_dir = self.get_package_dir('.'.join(d.split(os.sep))) |
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else: |
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build_dir = os.path.join(self.build_src, d) |
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funcs = [f for f in files if hasattr(f, '__call__')] |
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files = [f for f in files if not hasattr(f, '__call__')] |
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for f in funcs: |
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if f.__code__.co_argcount==1: |
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s = f(build_dir) |
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else: |
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s = f() |
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if s is not None: |
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if isinstance(s, list): |
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files.extend(s) |
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elif isinstance(s, str): |
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files.append(s) |
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else: |
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raise TypeError(repr(s)) |
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filenames = get_data_files((d, files)) |
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new_data_files.append((d, filenames)) |
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else: |
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raise TypeError(repr(data)) |
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self.data_files[:] = new_data_files |
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def _build_npy_pkg_config(self, info, gd): |
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template, install_dir, subst_dict = info |
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template_dir = os.path.dirname(template) |
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for k, v in gd.items(): |
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subst_dict[k] = v |
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if self.inplace == 1: |
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generated_dir = os.path.join(template_dir, install_dir) |
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else: |
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generated_dir = os.path.join(self.build_src, template_dir, |
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install_dir) |
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generated = os.path.basename(os.path.splitext(template)[0]) |
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generated_path = os.path.join(generated_dir, generated) |
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if not os.path.exists(generated_dir): |
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os.makedirs(generated_dir) |
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subst_vars(generated_path, template, subst_dict) |
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full_install_dir = os.path.join(template_dir, install_dir) |
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return full_install_dir, generated_path |
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def build_npy_pkg_config(self): |
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log.info('build_src: building npy-pkg config files') |
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install_cmd = copy.copy(get_cmd('install')) |
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if not install_cmd.finalized == 1: |
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install_cmd.finalize_options() |
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build_npkg = False |
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if self.inplace == 1: |
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top_prefix = '.' |
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build_npkg = True |
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elif hasattr(install_cmd, 'install_libbase'): |
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top_prefix = install_cmd.install_libbase |
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build_npkg = True |
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if build_npkg: |
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for pkg, infos in self.distribution.installed_pkg_config.items(): |
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pkg_path = self.distribution.package_dir[pkg] |
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prefix = os.path.join(os.path.abspath(top_prefix), pkg_path) |
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d = {'prefix': prefix} |
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for info in infos: |
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install_dir, generated = self._build_npy_pkg_config(info, d) |
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self.distribution.data_files.append((install_dir, |
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[generated])) |
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def build_py_modules_sources(self): |
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if not self.py_modules: |
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return |
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log.info('building py_modules sources') |
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new_py_modules = [] |
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for source in self.py_modules: |
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if is_sequence(source) and len(source)==3: |
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package, module_base, source = source |
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if self.inplace: |
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build_dir = self.get_package_dir(package) |
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else: |
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build_dir = os.path.join(self.build_src, |
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os.path.join(*package.split('.'))) |
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if hasattr(source, '__call__'): |
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target = os.path.join(build_dir, module_base + '.py') |
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source = source(target) |
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if source is None: |
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continue |
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modules = [(package, module_base, source)] |
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if package not in self.py_modules_dict: |
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self.py_modules_dict[package] = [] |
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self.py_modules_dict[package] += modules |
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else: |
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new_py_modules.append(source) |
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self.py_modules[:] = new_py_modules |
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def build_library_sources(self, lib_name, build_info): |
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sources = list(build_info.get('sources', [])) |
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if not sources: |
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return |
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log.info('building library "%s" sources' % (lib_name)) |
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sources = self.generate_sources(sources, (lib_name, build_info)) |
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sources = self.template_sources(sources, (lib_name, build_info)) |
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sources, h_files = self.filter_h_files(sources) |
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if h_files: |
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log.info('%s - nothing done with h_files = %s', |
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self.package, h_files) |
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build_info['sources'] = sources |
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return |
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def build_extension_sources(self, ext): |
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sources = list(ext.sources) |
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log.info('building extension "%s" sources' % (ext.name)) |
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fullname = self.get_ext_fullname(ext.name) |
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modpath = fullname.split('.') |
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package = '.'.join(modpath[0:-1]) |
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if self.inplace: |
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self.ext_target_dir = self.get_package_dir(package) |
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sources = self.generate_sources(sources, ext) |
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sources = self.template_sources(sources, ext) |
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sources = self.swig_sources(sources, ext) |
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sources = self.f2py_sources(sources, ext) |
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sources = self.pyrex_sources(sources, ext) |
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sources, py_files = self.filter_py_files(sources) |
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if package not in self.py_modules_dict: |
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self.py_modules_dict[package] = [] |
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modules = [] |
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for f in py_files: |
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module = os.path.splitext(os.path.basename(f))[0] |
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modules.append((package, module, f)) |
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self.py_modules_dict[package] += modules |
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sources, h_files = self.filter_h_files(sources) |
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if h_files: |
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log.info('%s - nothing done with h_files = %s', |
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package, h_files) |
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ext.sources = sources |
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def generate_sources(self, sources, extension): |
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new_sources = [] |
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func_sources = [] |
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for source in sources: |
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if is_string(source): |
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new_sources.append(source) |
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else: |
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func_sources.append(source) |
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if not func_sources: |
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return new_sources |
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if self.inplace and not is_sequence(extension): |
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build_dir = self.ext_target_dir |
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else: |
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if is_sequence(extension): |
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name = extension[0] |
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else: |
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name = extension.name |
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build_dir = os.path.join(*([self.build_src] |
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+name.split('.')[:-1])) |
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self.mkpath(build_dir) |
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if self.verbose_cfg: |
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new_level = log.INFO |
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else: |
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new_level = log.WARN |
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old_level = log.set_threshold(new_level) |
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for func in func_sources: |
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source = func(extension, build_dir) |
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if not source: |
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continue |
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if is_sequence(source): |
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[log.info(" adding '%s' to sources." % (s,)) for s in source] |
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new_sources.extend(source) |
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else: |
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log.info(" adding '%s' to sources." % (source,)) |
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new_sources.append(source) |
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log.set_threshold(old_level) |
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return new_sources |
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def filter_py_files(self, sources): |
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return self.filter_files(sources, ['.py']) |
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def filter_h_files(self, sources): |
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return self.filter_files(sources, ['.h', '.hpp', '.inc']) |
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def filter_files(self, sources, exts = []): |
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new_sources = [] |
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files = [] |
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for source in sources: |
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(base, ext) = os.path.splitext(source) |
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if ext in exts: |
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files.append(source) |
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else: |
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new_sources.append(source) |
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return new_sources, files |
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def template_sources(self, sources, extension): |
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new_sources = [] |
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if is_sequence(extension): |
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depends = extension[1].get('depends') |
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include_dirs = extension[1].get('include_dirs') |
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else: |
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depends = extension.depends |
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include_dirs = extension.include_dirs |
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for source in sources: |
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(base, ext) = os.path.splitext(source) |
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if ext == '.src': |
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if self.inplace: |
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target_dir = os.path.dirname(base) |
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else: |
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target_dir = appendpath(self.build_src, os.path.dirname(base)) |
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self.mkpath(target_dir) |
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target_file = os.path.join(target_dir, os.path.basename(base)) |
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if (self.force or newer_group([source] + depends, target_file)): |
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if _f_pyf_ext_match(base): |
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log.info("from_template:> %s" % (target_file)) |
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outstr = process_f_file(source) |
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else: |
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log.info("conv_template:> %s" % (target_file)) |
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outstr = process_c_file(source) |
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with open(target_file, 'w') as fid: |
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fid.write(outstr) |
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if _header_ext_match(target_file): |
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d = os.path.dirname(target_file) |
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if d not in include_dirs: |
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log.info(" adding '%s' to include_dirs." % (d)) |
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include_dirs.append(d) |
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new_sources.append(target_file) |
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else: |
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new_sources.append(source) |
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return new_sources |
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def pyrex_sources(self, sources, extension): |
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"""Pyrex not supported; this remains for Cython support (see below)""" |
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new_sources = [] |
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ext_name = extension.name.split('.')[-1] |
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for source in sources: |
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(base, ext) = os.path.splitext(source) |
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if ext == '.pyx': |
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target_file = self.generate_a_pyrex_source(base, ext_name, |
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source, |
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extension) |
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new_sources.append(target_file) |
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else: |
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new_sources.append(source) |
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return new_sources |
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def generate_a_pyrex_source(self, base, ext_name, source, extension): |
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"""Pyrex is not supported, but some projects monkeypatch this method. |
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That allows compiling Cython code, see gh-6955. |
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This method will remain here for compatibility reasons. |
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""" |
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return [] |
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def f2py_sources(self, sources, extension): |
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new_sources = [] |
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f2py_sources = [] |
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f_sources = [] |
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f2py_targets = {} |
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target_dirs = [] |
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ext_name = extension.name.split('.')[-1] |
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skip_f2py = 0 |
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for source in sources: |
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(base, ext) = os.path.splitext(source) |
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if ext == '.pyf': |
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if self.inplace: |
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target_dir = os.path.dirname(base) |
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else: |
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target_dir = appendpath(self.build_src, os.path.dirname(base)) |
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if os.path.isfile(source): |
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name = get_f2py_modulename(source) |
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if name != ext_name: |
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raise DistutilsSetupError('mismatch of extension names: %s ' |
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'provides %r but expected %r' % ( |
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source, name, ext_name)) |
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target_file = os.path.join(target_dir, name+'module.c') |
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else: |
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log.debug(' source %s does not exist: skipping f2py\'ing.' \ |
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% (source)) |
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name = ext_name |
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skip_f2py = 1 |
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target_file = os.path.join(target_dir, name+'module.c') |
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if not os.path.isfile(target_file): |
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log.warn(' target %s does not exist:\n '\ |
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'Assuming %smodule.c was generated with '\ |
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'"build_src --inplace" command.' \ |
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% (target_file, name)) |
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target_dir = os.path.dirname(base) |
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target_file = os.path.join(target_dir, name+'module.c') |
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if not os.path.isfile(target_file): |
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raise DistutilsSetupError("%r missing" % (target_file,)) |
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log.info(' Yes! Using %r as up-to-date target.' \ |
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% (target_file)) |
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target_dirs.append(target_dir) |
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f2py_sources.append(source) |
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f2py_targets[source] = target_file |
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new_sources.append(target_file) |
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elif fortran_ext_match(ext): |
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f_sources.append(source) |
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else: |
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new_sources.append(source) |
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if not (f2py_sources or f_sources): |
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return new_sources |
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for d in target_dirs: |
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self.mkpath(d) |
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f2py_options = extension.f2py_options + self.f2py_opts |
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if self.distribution.libraries: |
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for name, build_info in self.distribution.libraries: |
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if name in extension.libraries: |
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f2py_options.extend(build_info.get('f2py_options', [])) |
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log.info("f2py options: %s" % (f2py_options)) |
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|
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if f2py_sources: |
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if len(f2py_sources) != 1: |
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raise DistutilsSetupError( |
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'only one .pyf file is allowed per extension module but got'\ |
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' more: %r' % (f2py_sources,)) |
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source = f2py_sources[0] |
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target_file = f2py_targets[source] |
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target_dir = os.path.dirname(target_file) or '.' |
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depends = [source] + extension.depends |
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if (self.force or newer_group(depends, target_file, 'newer')) \ |
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and not skip_f2py: |
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log.info("f2py: %s" % (source)) |
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from numpy.f2py import f2py2e |
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f2py2e.run_main(f2py_options |
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+ ['--build-dir', target_dir, source]) |
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else: |
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log.debug(" skipping '%s' f2py interface (up-to-date)" % (source)) |
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else: |
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|
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if is_sequence(extension): |
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name = extension[0] |
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else: name = extension.name |
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target_dir = os.path.join(*([self.build_src] |
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+name.split('.')[:-1])) |
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target_file = os.path.join(target_dir, ext_name + 'module.c') |
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new_sources.append(target_file) |
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depends = f_sources + extension.depends |
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if (self.force or newer_group(depends, target_file, 'newer')) \ |
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and not skip_f2py: |
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log.info("f2py:> %s" % (target_file)) |
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self.mkpath(target_dir) |
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from numpy.f2py import f2py2e |
|
f2py2e.run_main(f2py_options + ['--lower', |
|
'--build-dir', target_dir]+\ |
|
['-m', ext_name]+f_sources) |
|
else: |
|
log.debug(" skipping f2py fortran files for '%s' (up-to-date)"\ |
|
% (target_file)) |
|
|
|
if not os.path.isfile(target_file): |
|
raise DistutilsError("f2py target file %r not generated" % (target_file,)) |
|
|
|
build_dir = os.path.join(self.build_src, target_dir) |
|
target_c = os.path.join(build_dir, 'fortranobject.c') |
|
target_h = os.path.join(build_dir, 'fortranobject.h') |
|
log.info(" adding '%s' to sources." % (target_c)) |
|
new_sources.append(target_c) |
|
if build_dir not in extension.include_dirs: |
|
log.info(" adding '%s' to include_dirs." % (build_dir)) |
|
extension.include_dirs.append(build_dir) |
|
|
|
if not skip_f2py: |
|
import numpy.f2py |
|
d = os.path.dirname(numpy.f2py.__file__) |
|
source_c = os.path.join(d, 'src', 'fortranobject.c') |
|
source_h = os.path.join(d, 'src', 'fortranobject.h') |
|
if newer(source_c, target_c) or newer(source_h, target_h): |
|
self.mkpath(os.path.dirname(target_c)) |
|
self.copy_file(source_c, target_c) |
|
self.copy_file(source_h, target_h) |
|
else: |
|
if not os.path.isfile(target_c): |
|
raise DistutilsSetupError("f2py target_c file %r not found" % (target_c,)) |
|
if not os.path.isfile(target_h): |
|
raise DistutilsSetupError("f2py target_h file %r not found" % (target_h,)) |
|
|
|
for name_ext in ['-f2pywrappers.f', '-f2pywrappers2.f90']: |
|
filename = os.path.join(target_dir, ext_name + name_ext) |
|
if os.path.isfile(filename): |
|
log.info(" adding '%s' to sources." % (filename)) |
|
f_sources.append(filename) |
|
|
|
return new_sources + f_sources |
|
|
|
def swig_sources(self, sources, extension): |
|
|
|
|
|
|
|
new_sources = [] |
|
swig_sources = [] |
|
swig_targets = {} |
|
target_dirs = [] |
|
py_files = [] |
|
target_ext = '.c' |
|
if '-c++' in extension.swig_opts: |
|
typ = 'c++' |
|
is_cpp = True |
|
extension.swig_opts.remove('-c++') |
|
elif self.swig_cpp: |
|
typ = 'c++' |
|
is_cpp = True |
|
else: |
|
typ = None |
|
is_cpp = False |
|
skip_swig = 0 |
|
ext_name = extension.name.split('.')[-1] |
|
|
|
for source in sources: |
|
(base, ext) = os.path.splitext(source) |
|
if ext == '.i': |
|
|
|
|
|
if self.inplace: |
|
target_dir = os.path.dirname(base) |
|
py_target_dir = self.ext_target_dir |
|
else: |
|
target_dir = appendpath(self.build_src, os.path.dirname(base)) |
|
py_target_dir = target_dir |
|
if os.path.isfile(source): |
|
name = get_swig_modulename(source) |
|
if name != ext_name[1:]: |
|
raise DistutilsSetupError( |
|
'mismatch of extension names: %s provides %r' |
|
' but expected %r' % (source, name, ext_name[1:])) |
|
if typ is None: |
|
typ = get_swig_target(source) |
|
is_cpp = typ=='c++' |
|
else: |
|
typ2 = get_swig_target(source) |
|
if typ2 is None: |
|
log.warn('source %r does not define swig target, assuming %s swig target' \ |
|
% (source, typ)) |
|
elif typ!=typ2: |
|
log.warn('expected %r but source %r defines %r swig target' \ |
|
% (typ, source, typ2)) |
|
if typ2=='c++': |
|
log.warn('resetting swig target to c++ (some targets may have .c extension)') |
|
is_cpp = True |
|
else: |
|
log.warn('assuming that %r has c++ swig target' % (source)) |
|
if is_cpp: |
|
target_ext = '.cpp' |
|
target_file = os.path.join(target_dir, '%s_wrap%s' \ |
|
% (name, target_ext)) |
|
else: |
|
log.warn(' source %s does not exist: skipping swig\'ing.' \ |
|
% (source)) |
|
name = ext_name[1:] |
|
skip_swig = 1 |
|
target_file = _find_swig_target(target_dir, name) |
|
if not os.path.isfile(target_file): |
|
log.warn(' target %s does not exist:\n '\ |
|
'Assuming %s_wrap.{c,cpp} was generated with '\ |
|
'"build_src --inplace" command.' \ |
|
% (target_file, name)) |
|
target_dir = os.path.dirname(base) |
|
target_file = _find_swig_target(target_dir, name) |
|
if not os.path.isfile(target_file): |
|
raise DistutilsSetupError("%r missing" % (target_file,)) |
|
log.warn(' Yes! Using %r as up-to-date target.' \ |
|
% (target_file)) |
|
target_dirs.append(target_dir) |
|
new_sources.append(target_file) |
|
py_files.append(os.path.join(py_target_dir, name+'.py')) |
|
swig_sources.append(source) |
|
swig_targets[source] = new_sources[-1] |
|
else: |
|
new_sources.append(source) |
|
|
|
if not swig_sources: |
|
return new_sources |
|
|
|
if skip_swig: |
|
return new_sources + py_files |
|
|
|
for d in target_dirs: |
|
self.mkpath(d) |
|
|
|
swig = self.swig or self.find_swig() |
|
swig_cmd = [swig, "-python"] + extension.swig_opts |
|
if is_cpp: |
|
swig_cmd.append('-c++') |
|
for d in extension.include_dirs: |
|
swig_cmd.append('-I'+d) |
|
for source in swig_sources: |
|
target = swig_targets[source] |
|
depends = [source] + extension.depends |
|
if self.force or newer_group(depends, target, 'newer'): |
|
log.info("%s: %s" % (os.path.basename(swig) \ |
|
+ (is_cpp and '++' or ''), source)) |
|
self.spawn(swig_cmd + self.swig_opts \ |
|
+ ["-o", target, '-outdir', py_target_dir, source]) |
|
else: |
|
log.debug(" skipping '%s' swig interface (up-to-date)" \ |
|
% (source)) |
|
|
|
return new_sources + py_files |
|
|
|
_f_pyf_ext_match = re.compile(r'.*\.(f90|f95|f77|for|ftn|f|pyf)\Z', re.I).match |
|
_header_ext_match = re.compile(r'.*\.(inc|h|hpp)\Z', re.I).match |
|
|
|
|
|
_swig_module_name_match = re.compile(r'\s*%module\s*(.*\(\s*package\s*=\s*"(?P<package>[\w_]+)".*\)|)\s*(?P<name>[\w_]+)', |
|
re.I).match |
|
_has_c_header = re.compile(r'-\*-\s*c\s*-\*-', re.I).search |
|
_has_cpp_header = re.compile(r'-\*-\s*c\+\+\s*-\*-', re.I).search |
|
|
|
def get_swig_target(source): |
|
with open(source) as f: |
|
result = None |
|
line = f.readline() |
|
if _has_cpp_header(line): |
|
result = 'c++' |
|
if _has_c_header(line): |
|
result = 'c' |
|
return result |
|
|
|
def get_swig_modulename(source): |
|
with open(source) as f: |
|
name = None |
|
for line in f: |
|
m = _swig_module_name_match(line) |
|
if m: |
|
name = m.group('name') |
|
break |
|
return name |
|
|
|
def _find_swig_target(target_dir, name): |
|
for ext in ['.cpp', '.c']: |
|
target = os.path.join(target_dir, '%s_wrap%s' % (name, ext)) |
|
if os.path.isfile(target): |
|
break |
|
return target |
|
|
|
|
|
|
|
_f2py_module_name_match = re.compile(r'\s*python\s*module\s*(?P<name>[\w_]+)', |
|
re.I).match |
|
_f2py_user_module_name_match = re.compile(r'\s*python\s*module\s*(?P<name>[\w_]*?' |
|
r'__user__[\w_]*)', re.I).match |
|
|
|
def get_f2py_modulename(source): |
|
name = None |
|
with open(source) as f: |
|
for line in f: |
|
m = _f2py_module_name_match(line) |
|
if m: |
|
if _f2py_user_module_name_match(line): |
|
continue |
|
name = m.group('name') |
|
break |
|
return name |
|
|
|
|
|
|