neuropictor / ckpt /fMRI2fMRI_UKB /fMRI_AutoEncoder.yaml
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# Transformer Settings
Model:
# - transformer-
in_chans: 1
encoder_depth: 24 # 24
embed_dim: 1024 # 1024
decoder_depth: 24 # 8
decoder_embed_dim: 1024
num_heads: 16
drop_rate: 0.01
norm_before: True
Train:
lr: 0.0005 # 0.0005
beta1: 0.9 # adam optimizer beta1
beta2: 0.95 # adam optimizer beta2
weight_decay: 0.01
gamma: 0.5
decay_type: 'linear' # 'constant', 'milestone', 'linear'
max_iters: 600000 # 300000
drop_steps: 120000
num_warmup: 20000 # 10000 # 10000
batch_size: 384
accum_grad: 1
grad_clip: 0.1
label_smooth: 0 # 0.1
restore: False # whether to continue learning
pretrain_weight: '' # set '' as None
log_interval: 1 # step
sample_interval: 100
save_interval: 5000 # 40000
# DATA Settings
Data:
path: './DATACENTER/UKB/2_0_hdf5'
flip: False
center_crop: False
image_size: [256, 256] # [h, w]
patch_size: 16
norm: False # norm to [-1, 1] otherwise [0, 1]
val_ratio: 0.01